Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.35□□□□□ -1.39
RIF1Q5UIP0 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC6.35□□□□□ -1.39
RIF1Q5UIP0 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
RIF1Q5UIP0 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC6.35□□□□□ -1.39
RIF1Q5UIP0 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.35□□□□□ -1.39
RIF1Q5UIP0 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RIF1Q5UIP0 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RIF1Q5UIP0 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.35□□□□□ -1.39
RIF1Q5UIP0 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RIF1Q5UIP0 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RIF1Q5UIP0 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
RIF1Q5UIP0 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.35□□□□□ -1.39
RIF1Q5UIP0 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RIF1Q5UIP0 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC6.35□□□□□ -1.39
RIF1Q5UIP0 RACGAP1P-201ENST00000550663 1879 ntBASIC6.35□□□□□ -1.39
RIF1Q5UIP0 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RIF1Q5UIP0 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RIF1Q5UIP0 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RIF1Q5UIP0 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC6.35□□□□□ -1.39
RIF1Q5UIP0 AL391422.1-201ENST00000402155 436 ntBASIC6.35□□□□□ -1.39
RIF1Q5UIP0 AL096711.1-201ENST00000404780 554 ntBASIC6.35□□□□□ -1.39
RIF1Q5UIP0 AC130360.1-201ENST00000425489 1117 ntBASIC6.35□□□□□ -1.39
RIF1Q5UIP0 EIF2S2P3-201ENST00000428356 999 ntBASIC6.35□□□□□ -1.39
RIF1Q5UIP0 AC023141.3-201ENST00000436698 278 ntBASIC6.35□□□□□ -1.39
RIF1Q5UIP0 AC234771.3-201ENST00000454984 622 ntBASIC6.35□□□□□ -1.39
RIF1Q5UIP0 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.35□□□□□ -1.39
RIF1Q5UIP0 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.35□□□□□ -1.39
RIF1Q5UIP0 AC130365.2-201ENST00000525882 1201 ntBASIC6.35□□□□□ -1.39
RIF1Q5UIP0 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RIF1Q5UIP0 RPA2P1-201ENST00000556557 721 ntBASIC6.35□□□□□ -1.39
RIF1Q5UIP0 MIR6127-201ENST00000614019 109 ntBASIC6.35□□□□□ -1.39
RIF1Q5UIP0 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.35□□□□□ -1.39
RIF1Q5UIP0 AC100827.5-201ENST00000615883 426 ntBASIC6.35□□□□□ -1.39
RIF1Q5UIP0 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.35□□□□□ -1.39
RIF1Q5UIP0 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC6.35□□□□□ -1.39
RIF1Q5UIP0 AL365217.1-201ENST00000398578 2436 ntBASIC6.35□□□□□ -1.39
RIF1Q5UIP0 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RIF1Q5UIP0 SALL1P1-201ENST00000438101 3837 ntBASIC6.34□□□□□ -1.39
RIF1Q5UIP0 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 RPL31P11-201ENST00000426558 1558 ntBASIC6.34□□□□□ -1.39
RIF1Q5UIP0 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 RNA5SP46-201ENST00000362370 120 ntBASIC6.34□□□□□ -1.39
RIF1Q5UIP0 RNU6-1055P-201ENST00000391085 107 ntBASIC6.34□□□□□ -1.39
RIF1Q5UIP0 AC245060.4-201ENST00000413293 1121 ntBASIC6.34□□□□□ -1.39
RIF1Q5UIP0 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 SOCS5P1-201ENST00000440415 949 ntBASIC6.34□□□□□ -1.39
RIF1Q5UIP0 Z80107.2-201ENST00000445127 392 ntBASIC6.34□□□□□ -1.39
RIF1Q5UIP0 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 AC092121.1-201ENST00000569452 202 ntBASIC6.34□□□□□ -1.39
RIF1Q5UIP0 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 CDH18-203ENST00000502796 2386 ntTSL 2 BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 AC025470.1-201ENST00000510053 2032 ntBASIC6.34□□□□□ -1.39
RIF1Q5UIP0 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RIF1Q5UIP0 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
RIF1Q5UIP0 SNORA70.3-201ENST00000365075 132 ntBASIC6.34□□□□□ -1.4
RIF1Q5UIP0 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.34□□□□□ -1.4
RIF1Q5UIP0 RPL34P3-201ENST00000421454 338 ntBASIC6.34□□□□□ -1.4
RIF1Q5UIP0 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.34□□□□□ -1.4
RIF1Q5UIP0 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
RIF1Q5UIP0 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
RIF1Q5UIP0 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.34□□□□□ -1.4
RIF1Q5UIP0 OR51K1P-201ENST00000510214 950 ntBASIC6.34□□□□□ -1.4
RIF1Q5UIP0 SETP3-201ENST00000581726 813 ntBASIC6.34□□□□□ -1.4
RIF1Q5UIP0 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
RIF1Q5UIP0 AC005393.1-201ENST00000617916 584 ntBASIC6.34□□□□□ -1.4
RIF1Q5UIP0 LINC02495-203ENST00000636704 242 ntBASIC6.34□□□□□ -1.4
RIF1Q5UIP0 OR8G3P-202ENST00000641572 1255 ntBASIC6.34□□□□□ -1.4
RIF1Q5UIP0 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
RIF1Q5UIP0 AC022150.4-201ENST00000598322 2848 ntBASIC6.34□□□□□ -1.4
RIF1Q5UIP0 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
RIF1Q5UIP0 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.34□□□□□ -1.4
RIF1Q5UIP0 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
RIF1Q5UIP0 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.4
RIF1Q5UIP0 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RIF1Q5UIP0 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms