Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.5□□□□□ -1.37
NR1H2P55055 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.5□□□□□ -1.37
NR1H2P55055 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NR1H2P55055 ARAFP1-201ENST00000422172 605 ntBASIC6.5□□□□□ -1.37
NR1H2P55055 AC006455.6-201ENST00000426192 893 ntBASIC6.5□□□□□ -1.37
NR1H2P55055 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC6.5□□□□□ -1.37
NR1H2P55055 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.5□□□□□ -1.37
NR1H2P55055 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC6.5□□□□□ -1.37
NR1H2P55055 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC6.5□□□□□ -1.37
NR1H2P55055 RPLP0P1-201ENST00000457002 361 ntBASIC6.5□□□□□ -1.37
NR1H2P55055 SNORA35.1-201ENST00000458908 128 ntBASIC6.5□□□□□ -1.37
NR1H2P55055 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NR1H2P55055 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NR1H2P55055 AC084878.1-201ENST00000480555 648 ntBASIC6.5□□□□□ -1.37
NR1H2P55055 ANK3-213ENST00000486349 493 ntTSL 2 BASIC6.5□□□□□ -1.37
NR1H2P55055 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC6.5□□□□□ -1.37
NR1H2P55055 AC009879.1-201ENST00000520029 839 ntBASIC6.5□□□□□ -1.37
NR1H2P55055 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.5□□□□□ -1.37
NR1H2P55055 OR4C1P-201ENST00000530880 937 ntBASIC6.5□□□□□ -1.37
NR1H2P55055 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC6.5□□□□□ -1.37
NR1H2P55055 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.5□□□□□ -1.37
NR1H2P55055 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.5□□□□□ -1.37
NR1H2P55055 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC6.5□□□□□ -1.37
NR1H2P55055 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC6.5□□□□□ -1.37
NR1H2P55055 AL136139.1-201ENST00000605568 222 ntBASIC6.5□□□□□ -1.37
NR1H2P55055 RN7SL778P-201ENST00000607160 297 ntBASIC6.5□□□□□ -1.37
NR1H2P55055 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.5□□□□□ -1.37
NR1H2P55055 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.5□□□□□ -1.37
NR1H2P55055 MIR8082-201ENST00000612488 81 ntBASIC6.5□□□□□ -1.37
NR1H2P55055 U1.41-201ENST00000617626 165 ntBASIC6.5□□□□□ -1.37
NR1H2P55055 OR1N1-202ENST00000619659 939 ntBASIC6.5□□□□□ -1.37
NR1H2P55055 AC004836.1-201ENST00000623032 634 ntBASIC6.5□□□□□ -1.37
NR1H2P55055 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC6.5□□□□□ -1.37
NR1H2P55055 AC009120.2-204ENST00000621548 2032 ntBASIC6.5□□□□□ -1.37
NR1H2P55055 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NR1H2P55055 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NR1H2P55055 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NR1H2P55055 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
NR1H2P55055 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NR1H2P55055 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.5□□□□□ -1.37
NR1H2P55055 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.5□□□□□ -1.37
NR1H2P55055 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.5□□□□□ -1.37
NR1H2P55055 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.5□□□□□ -1.37
NR1H2P55055 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
NR1H2P55055 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NR1H2P55055 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
NR1H2P55055 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
NR1H2P55055 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
NR1H2P55055 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NR1H2P55055 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NR1H2P55055 CASC19-238ENST00000641523 1558 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NR1H2P55055 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC6.49□□□□□ -1.37
NR1H2P55055 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NR1H2P55055 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NR1H2P55055 RAB5CP1-201ENST00000395972 580 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC6.49□□□□□ -1.37
NR1H2P55055 AL390840.1-201ENST00000420303 988 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC6.49□□□□□ -1.37
NR1H2P55055 GAPDHP69-201ENST00000425504 1008 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.49□□□□□ -1.37
NR1H2P55055 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.49□□□□□ -1.37
NR1H2P55055 AC009362.1-201ENST00000427253 406 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 AC104698.1-201ENST00000435671 276 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.49□□□□□ -1.37
NR1H2P55055 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.49□□□□□ -1.37
NR1H2P55055 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC6.49□□□□□ -1.37
NR1H2P55055 EIF3LP2-201ENST00000457262 807 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 RN7SL791P-201ENST00000467868 295 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 RN7SL688P-201ENST00000471754 275 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 AC008799.2-201ENST00000484429 647 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 AF305872.1-201ENST00000485217 471 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 AC008040.4-201ENST00000494834 768 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 RNU6-319P-201ENST00000516025 108 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.49□□□□□ -1.37
NR1H2P55055 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC6.49□□□□□ -1.37
NR1H2P55055 NDUFA3P2-201ENST00000531434 232 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 OR4A21P-201ENST00000532759 944 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
NR1H2P55055 AC068790.1-201ENST00000536166 355 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.49□□□□□ -1.37
NR1H2P55055 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.49□□□□□ -1.37
NR1H2P55055 AC090115.2-201ENST00000548060 883 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.49□□□□□ -1.37
NR1H2P55055 AC008126.1-201ENST00000549019 480 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC6.49□□□□□ -1.37
NR1H2P55055 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC6.49□□□□□ -1.37
NR1H2P55055 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.49□□□□□ -1.37
NR1H2P55055 AC027281.1-201ENST00000574178 758 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC6.49□□□□□ -1.37
NR1H2P55055 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
NR1H2P55055 COX6CP16-201ENST00000603667 216 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 AP001554.1-201ENST00000604533 376 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 BX322635.1-201ENST00000605804 496 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 U47924.1-201ENST00000606539 434 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC6.49□□□□□ -1.37
NR1H2P55055 AL021368.1-201ENST00000607490 540 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 AL139123.1-201ENST00000612008 430 ntBASIC6.49□□□□□ -1.37
NR1H2P55055 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.49□□□□□ -1.37
NR1H2P55055 AC241377.1-201ENST00000619797 406 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms