Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 MIR5095-201ENST00000578844 88 ntBASIC7.41□□□□□ -1.22
CIITAP33076 SYPL1P2-201ENST00000582878 727 ntBASIC7.41□□□□□ -1.22
CIITAP33076 OR7A8P-201ENST00000595427 913 ntBASIC7.41□□□□□ -1.22
CIITAP33076 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC7.41□□□□□ -1.22
CIITAP33076 AL953862.2-201ENST00000603089 820 ntBASIC7.41□□□□□ -1.22
CIITAP33076 AL589743.6-201ENST00000611025 117 ntBASIC7.41□□□□□ -1.22
CIITAP33076 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC7.41□□□□□ -1.22
CIITAP33076 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
CIITAP33076 AP001264.1-201ENST00000620602 703 ntBASIC7.41□□□□□ -1.22
CIITAP33076 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.41□□□□□ -1.22
CIITAP33076 NEK2P2-201ENST00000438441 1338 ntBASIC7.41□□□□□ -1.22
CIITAP33076 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC7.41□□□□□ -1.22
CIITAP33076 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CIITAP33076 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CIITAP33076 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CIITAP33076 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.41□□□□□ -1.22
CIITAP33076 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CIITAP33076 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.41□□□□□ -1.22
CIITAP33076 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CIITAP33076 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.4□□□□□ -1.22
CIITAP33076 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CIITAP33076 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CIITAP33076 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.4□□□□□ -1.22
CIITAP33076 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.4□□□□□ -1.22
CIITAP33076 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CIITAP33076 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
CIITAP33076 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CIITAP33076 SNORA64.3-201ENST00000365647 134 ntBASIC7.4□□□□□ -1.22
CIITAP33076 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC7.4□□□□□ -1.22
CIITAP33076 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CIITAP33076 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
CIITAP33076 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
CIITAP33076 MED28P4-201ENST00000433137 572 ntBASIC7.4□□□□□ -1.22
CIITAP33076 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.4□□□□□ -1.22
CIITAP33076 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.4□□□□□ -1.22
CIITAP33076 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CIITAP33076 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC7.4□□□□□ -1.22
CIITAP33076 AC026254.2-201ENST00000475295 371 ntBASIC7.4□□□□□ -1.22
CIITAP33076 AC117500.1-201ENST00000497352 755 ntBASIC7.4□□□□□ -1.22
CIITAP33076 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.4□□□□□ -1.22
CIITAP33076 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC7.4□□□□□ -1.22
CIITAP33076 AP001000.1-201ENST00000526843 742 ntBASIC7.4□□□□□ -1.22
CIITAP33076 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
CIITAP33076 OR52K3P-201ENST00000531655 943 ntBASIC7.4□□□□□ -1.22
CIITAP33076 AC037479.1-201ENST00000558361 625 ntBASIC7.4□□□□□ -1.22
CIITAP33076 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC7.4□□□□□ -1.22
CIITAP33076 OR7A11P-201ENST00000597719 953 ntBASIC7.4□□□□□ -1.22
CIITAP33076 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.4□□□□□ -1.22
CIITAP33076 AC048341.3-201ENST00000619323 491 ntBASIC7.4□□□□□ -1.22
CIITAP33076 AC089999.3-201ENST00000622440 577 ntBASIC7.4□□□□□ -1.22
CIITAP33076 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.4□□□□□ -1.22
CIITAP33076 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CIITAP33076 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.4□□□□□ -1.22
CIITAP33076 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CIITAP33076 AC010624.4-201ENST00000597606 1351 ntBASIC7.4□□□□□ -1.22
CIITAP33076 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CIITAP33076 RPL31P11-201ENST00000426558 1558 ntBASIC7.4□□□□□ -1.22
CIITAP33076 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
CIITAP33076 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CIITAP33076 AC241584.2-201ENST00000637142 2090 ntBASIC7.4□□□□□ -1.23
CIITAP33076 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CIITAP33076 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.4□□□□□ -1.23
CIITAP33076 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CIITAP33076 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.4□□□□□ -1.23
CIITAP33076 AC110597.1-201ENST00000562669 3176 ntBASIC7.4□□□□□ -1.23
CIITAP33076 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.4□□□□□ -1.23
CIITAP33076 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
CIITAP33076 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.4□□□□□ -1.23
CIITAP33076 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CIITAP33076 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
CIITAP33076 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
CIITAP33076 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CIITAP33076 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CIITAP33076 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CIITAP33076 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.39□□□□□ -1.23
CIITAP33076 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CIITAP33076 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.39□□□□□ -1.23
CIITAP33076 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CIITAP33076 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
CIITAP33076 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.39□□□□□ -1.23
CIITAP33076 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CIITAP33076 RN7SKP129-201ENST00000410288 299 ntBASIC7.39□□□□□ -1.23
CIITAP33076 GPN3P1-201ENST00000423883 535 ntBASIC7.39□□□□□ -1.23
CIITAP33076 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC7.39□□□□□ -1.23
CIITAP33076 AC245291.3-201ENST00000443400 292 ntBASIC7.39□□□□□ -1.23
CIITAP33076 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.39□□□□□ -1.23
CIITAP33076 YRDCP3-201ENST00000456507 480 ntBASIC7.39□□□□□ -1.23
CIITAP33076 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC7.39□□□□□ -1.23
CIITAP33076 SNORA58-201ENST00000505219 137 ntBASIC7.39□□□□□ -1.23
CIITAP33076 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC7.39□□□□□ -1.23
CIITAP33076 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC7.39□□□□□ -1.23
CIITAP33076 AC124891.1-201ENST00000536322 519 ntBASIC7.39□□□□□ -1.23
CIITAP33076 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
CIITAP33076 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CIITAP33076 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.39□□□□□ -1.23
CIITAP33076 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7.39□□□□□ -1.23
CIITAP33076 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC7.39□□□□□ -1.23
CIITAP33076 AC019257.2-201ENST00000605539 497 ntBASIC7.39□□□□□ -1.23
CIITAP33076 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.39□□□□□ -1.23
CIITAP33076 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms