Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CD40P25942 WNK1-220ENST00000574564 1401 ntBASIC6.39□□□□□ -1.39
CD40P25942 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CD40P25942 AL353807.3-201ENST00000500626 2505 ntBASIC6.39□□□□□ -1.39
CD40P25942 AC012213.2-201ENST00000562917 4597 ntBASIC6.39□□□□□ -1.39
CD40P25942 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC6.39□□□□□ -1.39
CD40P25942 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CD40P25942 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.39□□□□□ -1.39
CD40P25942 AC073342.2-201ENST00000595842 1800 ntBASIC6.39□□□□□ -1.39
CD40P25942 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CD40P25942 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.38□□□□□ -1.39
CD40P25942 AP003471.1-202ENST00000319051 1988 ntBASIC6.38□□□□□ -1.39
CD40P25942 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CD40P25942 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC6.38□□□□□ -1.39
CD40P25942 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CD40P25942 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CD40P25942 AC110998.1-201ENST00000519029 2053 ntBASIC6.38□□□□□ -1.39
CD40P25942 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC6.38□□□□□ -1.39
CD40P25942 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CD40P25942 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CD40P25942 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CD40P25942 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC6.38□□□□□ -1.39
CD40P25942 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CD40P25942 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.38□□□□□ -1.39
CD40P25942 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC6.38□□□□□ -1.39
CD40P25942 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CD40P25942 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CD40P25942 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC6.38□□□□□ -1.39
CD40P25942 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CD40P25942 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CD40P25942 U3.14-201ENST00000365363 227 ntBASIC6.38□□□□□ -1.39
CD40P25942 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CD40P25942 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CD40P25942 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CD40P25942 SNORD116-12-201ENST00000384468 92 ntBASIC6.38□□□□□ -1.39
CD40P25942 RNU6-636P-201ENST00000384598 107 ntBASIC6.38□□□□□ -1.39
CD40P25942 MIR431-201ENST00000385266 114 ntBASIC6.38□□□□□ -1.39
CD40P25942 CASP3-203ENST00000393588 677 ntTSL 4 BASIC6.38□□□□□ -1.39
CD40P25942 HMGB1P13-201ENST00000406019 642 ntBASIC6.38□□□□□ -1.39
CD40P25942 RN7SKP85-201ENST00000411349 318 ntBASIC6.38□□□□□ -1.39
CD40P25942 AC010385.1-201ENST00000412374 256 ntBASIC6.38□□□□□ -1.39
CD40P25942 AL161742.1-201ENST00000418154 584 ntBASIC6.38□□□□□ -1.39
CD40P25942 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.38□□□□□ -1.39
CD40P25942 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC6.38□□□□□ -1.39
CD40P25942 AL034379.1-201ENST00000423216 253 ntBASIC6.38□□□□□ -1.39
CD40P25942 CYP4F34P-201ENST00000425951 481 ntBASIC6.38□□□□□ -1.39
CD40P25942 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.38□□□□□ -1.39
CD40P25942 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.38□□□□□ -1.39
CD40P25942 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC6.38□□□□□ -1.39
CD40P25942 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.38□□□□□ -1.39
CD40P25942 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.38□□□□□ -1.39
CD40P25942 AC019080.2-201ENST00000453859 394 ntBASIC6.38□□□□□ -1.39
CD40P25942 RPL7P45-201ENST00000455851 743 ntBASIC6.38□□□□□ -1.39
CD40P25942 GTF2IP12-201ENST00000456547 356 ntBASIC6.38□□□□□ -1.39
CD40P25942 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.38□□□□□ -1.39
CD40P25942 RPS4XP19-201ENST00000460237 736 ntBASIC6.38□□□□□ -1.39
CD40P25942 TUBBP11-201ENST00000472255 252 ntBASIC6.38□□□□□ -1.39
CD40P25942 AC079203.1-201ENST00000487972 404 ntBASIC6.38□□□□□ -1.39
CD40P25942 RPL5P11-201ENST00000498068 893 ntBASIC6.38□□□□□ -1.39
CD40P25942 AC021146.11-201ENST00000503319 491 ntBASIC6.38□□□□□ -1.39
CD40P25942 OR7E163P-201ENST00000505943 894 ntBASIC6.38□□□□□ -1.39
CD40P25942 AC108120.1-201ENST00000506543 991 ntBASIC6.38□□□□□ -1.39
CD40P25942 CHCHD2P7-201ENST00000508008 452 ntBASIC6.38□□□□□ -1.39
CD40P25942 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC6.38□□□□□ -1.39
CD40P25942 BTG4P1-201ENST00000510421 183 ntBASIC6.38□□□□□ -1.39
CD40P25942 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.38□□□□□ -1.39
CD40P25942 MTCO3P28-201ENST00000513351 515 ntBASIC6.38□□□□□ -1.39
CD40P25942 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.38□□□□□ -1.39
CD40P25942 AP004607.5-201ENST00000532034 217 ntBASIC6.38□□□□□ -1.39
CD40P25942 AC135279.1-201ENST00000543493 504 ntBASIC6.38□□□□□ -1.39
CD40P25942 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.38□□□□□ -1.39
CD40P25942 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
CD40P25942 GNG2-215ENST00000557376 573 ntTSL 4 BASIC6.38□□□□□ -1.39
CD40P25942 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC6.38□□□□□ -1.39
CD40P25942 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.38□□□□□ -1.39
CD40P25942 AC138749.2-201ENST00000566048 167 ntBASIC6.38□□□□□ -1.39
CD40P25942 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CD40P25942 AC090826.1-203ENST00000569235 490 ntBASIC6.38□□□□□ -1.39
CD40P25942 RPS7P1-201ENST00000571702 585 ntBASIC6.38□□□□□ -1.39
CD40P25942 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC6.38□□□□□ -1.39
CD40P25942 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.38□□□□□ -1.39
CD40P25942 AP002906.1-201ENST00000603405 233 ntBASIC6.38□□□□□ -1.39
CD40P25942 AC005377.1-201ENST00000605126 456 ntBASIC6.38□□□□□ -1.39
CD40P25942 AC012510.1-201ENST00000607946 759 ntBASIC6.38□□□□□ -1.39
CD40P25942 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC6.38□□□□□ -1.39
CD40P25942 AC123767.1-202ENST00000620407 817 ntBASIC6.38□□□□□ -1.39
CD40P25942 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.38□□□□□ -1.39
CD40P25942 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC6.38□□□□□ -1.39
CD40P25942 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CD40P25942 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CD40P25942 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CD40P25942 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
CD40P25942 ICE2P1-201ENST00000512800 1849 ntBASIC6.38□□□□□ -1.39
CD40P25942 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.38□□□□□ -1.39
CD40P25942 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.38□□□□□ -1.39
CD40P25942 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CD40P25942 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC6.38□□□□□ -1.39
CD40P25942 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CD40P25942 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
CD40P25942 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms