Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC6.09□□□□□ -1.43
NCK1P16333 RPS21P1-201ENST00000434479 247 ntBASIC6.09□□□□□ -1.43
NCK1P16333 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC6.09□□□□□ -1.43
NCK1P16333 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC6.09□□□□□ -1.43
NCK1P16333 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC6.09□□□□□ -1.43
NCK1P16333 AC092967.1-201ENST00000449016 481 ntBASIC6.09□□□□□ -1.43
NCK1P16333 AC103563.5-201ENST00000455643 364 ntBASIC6.09□□□□□ -1.43
NCK1P16333 AC022206.1-201ENST00000495947 347 ntBASIC6.09□□□□□ -1.43
NCK1P16333 GAPDHP38-201ENST00000503632 1002 ntBASIC6.09□□□□□ -1.43
NCK1P16333 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC6.09□□□□□ -1.43
NCK1P16333 SUMO2P19-201ENST00000518920 295 ntBASIC6.09□□□□□ -1.43
NCK1P16333 OR4C1P-201ENST00000530880 937 ntBASIC6.09□□□□□ -1.43
NCK1P16333 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.09□□□□□ -1.43
NCK1P16333 AC069240.2-201ENST00000550242 609 ntBASIC6.09□□□□□ -1.43
NCK1P16333 AL162632.2-201ENST00000553933 399 ntBASIC6.09□□□□□ -1.43
NCK1P16333 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.09□□□□□ -1.43
NCK1P16333 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC6.09□□□□□ -1.43
NCK1P16333 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.09□□□□□ -1.43
NCK1P16333 AC024614.1-201ENST00000577546 307 ntBASIC6.09□□□□□ -1.43
NCK1P16333 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.09□□□□□ -1.43
NCK1P16333 AC073488.9-201ENST00000631601 754 ntBASIC6.09□□□□□ -1.43
NCK1P16333 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.09□□□□□ -1.43
NCK1P16333 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
NCK1P16333 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.09□□□□□ -1.43
NCK1P16333 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NCK1P16333 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.09□□□□□ -1.43
NCK1P16333 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
NCK1P16333 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.44
NCK1P16333 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.44
NCK1P16333 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.09□□□□□ -1.44
NCK1P16333 AC006600.2-201ENST00000624834 2506 ntBASIC6.08□□□□□ -1.44
NCK1P16333 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NCK1P16333 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.08□□□□□ -1.44
NCK1P16333 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
NCK1P16333 AL049634.1-201ENST00000453770 1720 ntBASIC6.08□□□□□ -1.44
NCK1P16333 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.08□□□□□ -1.44
NCK1P16333 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.08□□□□□ -1.44
NCK1P16333 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.08□□□□□ -1.44
NCK1P16333 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NCK1P16333 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
NCK1P16333 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NCK1P16333 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NCK1P16333 RNA5SP350-201ENST00000363298 111 ntBASIC6.08□□□□□ -1.44
NCK1P16333 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
NCK1P16333 NPM1P31-201ENST00000399021 764 ntBASIC6.08□□□□□ -1.44
NCK1P16333 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NCK1P16333 RPL34P27-201ENST00000428810 349 ntBASIC6.08□□□□□ -1.44
NCK1P16333 RPS10P21-201ENST00000430654 475 ntBASIC6.08□□□□□ -1.44
NCK1P16333 AC114402.2-201ENST00000432760 643 ntBASIC6.08□□□□□ -1.44
NCK1P16333 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC6.08□□□□□ -1.44
NCK1P16333 BX679664.2-201ENST00000439282 283 ntBASIC6.08□□□□□ -1.44
NCK1P16333 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.08□□□□□ -1.44
NCK1P16333 TVP23CP1-201ENST00000450317 639 ntBASIC6.08□□□□□ -1.44
NCK1P16333 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.08□□□□□ -1.44
NCK1P16333 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.08□□□□□ -1.44
NCK1P16333 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.08□□□□□ -1.44
NCK1P16333 RN7SL221P-201ENST00000466190 281 ntBASIC6.08□□□□□ -1.44
NCK1P16333 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC6.08□□□□□ -1.44
NCK1P16333 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6.08□□□□□ -1.44
NCK1P16333 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.08□□□□□ -1.44
NCK1P16333 RN7SKP67-201ENST00000515905 235 ntBASIC6.08□□□□□ -1.44
NCK1P16333 IGKV2D-38-201ENST00000518423 240 ntBASIC6.08□□□□□ -1.44
NCK1P16333 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC6.08□□□□□ -1.44
NCK1P16333 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.08□□□□□ -1.44
NCK1P16333 AC008429.2-201ENST00000523057 864 ntBASIC6.08□□□□□ -1.44
NCK1P16333 AC021820.1-201ENST00000525564 808 ntBASIC6.08□□□□□ -1.44
NCK1P16333 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.08□□□□□ -1.44
NCK1P16333 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
NCK1P16333 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC6.08□□□□□ -1.44
NCK1P16333 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.08□□□□□ -1.44
NCK1P16333 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.08□□□□□ -1.44
NCK1P16333 AC093909.6-201ENST00000624757 775 ntBASIC6.08□□□□□ -1.44
NCK1P16333 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
NCK1P16333 AC022726.2-201ENST00000634673 547 ntBASIC6.08□□□□□ -1.44
NCK1P16333 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NCK1P16333 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.08□□□□□ -1.44
NCK1P16333 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
NCK1P16333 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NCK1P16333 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
NCK1P16333 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NCK1P16333 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NCK1P16333 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
NCK1P16333 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.07□□□□□ -1.44
NCK1P16333 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NCK1P16333 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
NCK1P16333 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.07□□□□□ -1.44
NCK1P16333 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NCK1P16333 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.07□□□□□ -1.44
NCK1P16333 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
NCK1P16333 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.07□□□□□ -1.44
NCK1P16333 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
NCK1P16333 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NCK1P16333 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
NCK1P16333 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
NCK1P16333 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NCK1P16333 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
NCK1P16333 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
NCK1P16333 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
NCK1P16333 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NCK1P16333 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms