Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 NME1P1-201ENST00000420914 382 ntBASIC5.6□□□□□ -1.51
HLA-DQB1P01920 PPIL1P1-201ENST00000423936 499 ntBASIC5.6□□□□□ -1.51
HLA-DQB1P01920 GAPDHP57-201ENST00000424400 585 ntBASIC5.6□□□□□ -1.51
HLA-DQB1P01920 AL357632.1-201ENST00000426688 643 ntBASIC5.6□□□□□ -1.51
HLA-DQB1P01920 KRT8P51-201ENST00000438938 274 ntBASIC5.6□□□□□ -1.51
HLA-DQB1P01920 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DQB1P01920 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DQB1P01920 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DQB1P01920 AL354714.5-201ENST00000450131 590 ntBASIC5.6□□□□□ -1.51
HLA-DQB1P01920 RPL7AP30-201ENST00000482859 796 ntBASIC5.6□□□□□ -1.51
HLA-DQB1P01920 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HLA-DQB1P01920 SNX18P23-201ENST00000510867 677 ntBASIC5.6□□□□□ -1.51
HLA-DQB1P01920 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.6□□□□□ -1.51
HLA-DQB1P01920 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
HLA-DQB1P01920 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DQB1P01920 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DQB1P01920 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DQB1P01920 AC011447.2-201ENST00000592921 283 ntBASIC5.6□□□□□ -1.51
HLA-DQB1P01920 AL592504.1-201ENST00000605319 439 ntBASIC5.6□□□□□ -1.51
HLA-DQB1P01920 AL021368.3-201ENST00000607119 578 ntBASIC5.6□□□□□ -1.51
HLA-DQB1P01920 AC005277.2-201ENST00000617898 390 ntBASIC5.6□□□□□ -1.51
HLA-DQB1P01920 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DQB1P01920 AC018692.2-201ENST00000624130 348 ntBASIC5.6□□□□□ -1.51
HLA-DQB1P01920 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DQB1P01920 AL356585.10-201ENST00000641883 123 ntBASIC5.6□□□□□ -1.51
HLA-DQB1P01920 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HLA-DQB1P01920 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DQB1P01920 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DQB1P01920 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HLA-DQB1P01920 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HLA-DQB1P01920 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DQB1P01920 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HLA-DQB1P01920 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DQB1P01920 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DQB1P01920 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DQB1P01920 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DQB1P01920 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DQB1P01920 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
HLA-DQB1P01920 AC013268.3-201ENST00000262716 2324 ntBASIC5.59□□□□□ -1.51
HLA-DQB1P01920 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DQB1P01920 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
HLA-DQB1P01920 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
HLA-DQB1P01920 GOT2P1-201ENST00000440922 1309 ntBASIC5.59□□□□□ -1.51
HLA-DQB1P01920 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DQB1P01920 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DQB1P01920 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
HLA-DQB1P01920 RNA5SP53-201ENST00000391299 120 ntBASIC5.59□□□□□ -1.51
HLA-DQB1P01920 RN7SKP236-201ENST00000410635 284 ntBASIC5.59□□□□□ -1.51
HLA-DQB1P01920 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DQB1P01920 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DQB1P01920 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC5.59□□□□□ -1.51
HLA-DQB1P01920 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DQB1P01920 ANXA2P2-201ENST00000435128 1020 ntBASIC5.59□□□□□ -1.51
HLA-DQB1P01920 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DQB1P01920 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.59□□□□□ -1.51
HLA-DQB1P01920 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC5.59□□□□□ -1.51
HLA-DQB1P01920 RPS27AP3-201ENST00000453803 454 ntBASIC5.59□□□□□ -1.51
HLA-DQB1P01920 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DQB1P01920 AC091965.3-201ENST00000506236 208 ntBASIC5.59□□□□□ -1.51
HLA-DQB1P01920 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.59□□□□□ -1.51
HLA-DQB1P01920 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC5.59□□□□□ -1.51
HLA-DQB1P01920 REG4-204ENST00000530654 612 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DQB1P01920 NDUFA3P2-201ENST00000531434 232 ntBASIC5.59□□□□□ -1.51
HLA-DQB1P01920 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.59□□□□□ -1.51
HLA-DQB1P01920 AC140063.1-201ENST00000541343 259 ntBASIC5.59□□□□□ -1.51
HLA-DQB1P01920 FRG2IP-201ENST00000563581 781 ntBASIC5.59□□□□□ -1.51
HLA-DQB1P01920 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC5.59□□□□□ -1.51
HLA-DQB1P01920 AL589765.5-201ENST00000596133 515 ntBASIC5.59□□□□□ -1.51
HLA-DQB1P01920 AC092032.1-201ENST00000603090 165 ntBASIC5.59□□□□□ -1.51
HLA-DQB1P01920 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.59□□□□□ -1.51
HLA-DQB1P01920 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HLA-DQB1P01920 AC073263.3-201ENST00000624449 858 ntBASIC5.59□□□□□ -1.51
HLA-DQB1P01920 AL132640.3-201ENST00000630473 177 ntBASIC5.59□□□□□ -1.51
HLA-DQB1P01920 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC5.59□□□□□ -1.51
HLA-DQB1P01920 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DQB1P01920 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DQB1P01920 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HLA-DQB1P01920 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.59□□□□□ -1.52
HLA-DQB1P01920 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
HLA-DQB1P01920 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.59□□□□□ -1.52
HLA-DQB1P01920 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DQB1P01920 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.58□□□□□ -1.52
HLA-DQB1P01920 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DQB1P01920 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DQB1P01920 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DQB1P01920 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
HLA-DQB1P01920 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DQB1P01920 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DQB1P01920 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DQB1P01920 CASP4-201ENST00000393150 1340 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DQB1P01920 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DQB1P01920 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DQB1P01920 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HLA-DQB1P01920 RNA5SP301-201ENST00000362537 121 ntBASIC5.58□□□□□ -1.52
HLA-DQB1P01920 AL354766.1-201ENST00000423396 542 ntBASIC5.58□□□□□ -1.52
HLA-DQB1P01920 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC5.58□□□□□ -1.52
HLA-DQB1P01920 AC134879.1-201ENST00000426062 394 ntBASIC5.58□□□□□ -1.52
HLA-DQB1P01920 MTND1P10-201ENST00000426108 832 ntBASIC5.58□□□□□ -1.52
HLA-DQB1P01920 BX276092.6-201ENST00000430476 250 ntBASIC5.58□□□□□ -1.52
HLA-DQB1P01920 VDAC2P3-201ENST00000430995 828 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms