Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 KIAA0556-201ENST00000261588 6616 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 RPS17P15-201ENST00000475609 349 ntBASIC6.52□□□□□ -1.37
CHD7Q9P2D1 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 AC091078.2-201ENST00000557145 559 ntBASIC6.52□□□□□ -1.37
CHD7Q9P2D1 AC005244.1-201ENST00000582566 339 ntBASIC6.52□□□□□ -1.37
CHD7Q9P2D1 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 DISP1-201ENST00000284476 4762 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 LINC01226-208ENST00000640623 5019 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 ARID2-201ENST00000334344 8642 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 DDX3X-217ENST00000629496 5023 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 KLHL3-201ENST00000309755 6806 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 RPL23AP27-201ENST00000415161 451 ntBASIC6.52□□□□□ -1.37
CHD7Q9P2D1 AL390119.1-201ENST00000440329 312 ntBASIC6.52□□□□□ -1.37
CHD7Q9P2D1 Z80107.2-201ENST00000445127 392 ntBASIC6.52□□□□□ -1.37
CHD7Q9P2D1 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 PCNAP4-201ENST00000532690 730 ntBASIC6.52□□□□□ -1.37
CHD7Q9P2D1 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 MIR4776-2-201ENST00000580204 80 ntBASIC6.52□□□□□ -1.37
CHD7Q9P2D1 AC034229.6-201ENST00000623704 224 ntBASIC6.52□□□□□ -1.37
CHD7Q9P2D1 PSEN1-205ENST00000406768 4062 ntTSL 2 BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 TRIM44-201ENST00000299413 12964 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 ZNF286B-201ENST00000285274 5145 ntTSL 3 BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 ZFYVE26-207ENST00000555452 7309 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 AC130365.1-201ENST00000530524 1553 ntBASIC6.52□□□□□ -1.37
CHD7Q9P2D1 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.52□□□□□ -1.37
CHD7Q9P2D1 EFR3B-204ENST00000403714 7434 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 PSMC1P2-201ENST00000423961 1204 ntBASIC6.51□□□□□ -1.37
CHD7Q9P2D1 PPIAP10-201ENST00000438675 458 ntBASIC6.51□□□□□ -1.37
CHD7Q9P2D1 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 PLXNA2-201ENST00000367033 11444 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 PDE4DIP-237ENST00000585156 8439 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 MAPK10-287ENST00000641217 3037 ntBASIC6.51□□□□□ -1.37
CHD7Q9P2D1 SEMA6D-204ENST00000358066 5913 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 RNA5SP183-201ENST00000362452 119 ntBASIC6.51□□□□□ -1.37
CHD7Q9P2D1 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 AL109941.1-201ENST00000401925 229 ntBASIC6.51□□□□□ -1.37
CHD7Q9P2D1 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 AL596448.1-201ENST00000415024 392 ntBASIC6.51□□□□□ -1.37
CHD7Q9P2D1 AK4P4-201ENST00000419465 646 ntBASIC6.51□□□□□ -1.37
CHD7Q9P2D1 RPL12P3-201ENST00000440080 396 ntBASIC6.51□□□□□ -1.37
CHD7Q9P2D1 EEF1B2P5-201ENST00000444820 548 ntBASIC6.51□□□□□ -1.37
CHD7Q9P2D1 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 MORC2-202ENST00000397641 5181 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 ALDH2-201ENST00000261733 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 MYO7B-202ENST00000409816 6694 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 ZKSCAN1-206ENST00000620510 9192 ntTSL 5 BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 MYH2-202ENST00000397183 6078 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.51□□□□□ -1.37
CHD7Q9P2D1 RPL21P133-201ENST00000443666 476 ntBASIC6.51□□□□□ -1.37
CHD7Q9P2D1 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms