Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AL451054.1-201ENST00000621770 772 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 RPL36AP21-202ENST00000639134 430 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 OR7E11P-202ENST00000642027 1491 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 CYP39A1-201ENST00000275016 2176 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 Y_RNA.11-201ENST00000362375 109 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 RNU6-1011P-201ENST00000384668 107 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AL021331.1-201ENST00000402817 582 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 GAS8-AS1-201ENST00000408886 435 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 GLS-204ENST00000409428 816 ntTSL 2 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 RN7SKP89-201ENST00000410774 242 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 IGKV1OR2-3-201ENST00000411475 288 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 VN1R35P-201ENST00000428102 693 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AL022331.1-201ENST00000429025 477 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 RPL35P8-201ENST00000433284 337 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 HBBP1-201ENST00000433329 439 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 FTH1P20-201ENST00000434913 548 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AC002553.1-201ENST00000442828 802 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 RPL7P45-201ENST00000455851 743 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 RPL10P6-201ENST00000457497 318 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 HMGN1P10-201ENST00000474557 553 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 RPL9P33-201ENST00000484311 566 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AC079768.1-201ENST00000503181 711 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AC113430.1-201ENST00000506872 718 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 SNX18P25-201ENST00000510539 758 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AC109471.1-201ENST00000511631 612 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AC138866.1-201ENST00000514522 497 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 RNU6-889P-201ENST00000517189 103 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 OR8Q1P-201ENST00000526467 655 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AC092851.1-201ENST00000535964 478 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 NDFIP1P1-201ENST00000543144 525 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 MIR3137-201ENST00000577367 75 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AL035411.2-201ENST00000604022 421 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 HNRNPA1P67-201ENST00000604027 926 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AC024589.2-201ENST00000605642 1294 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AL590560.2-201ENST00000608430 732 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 AL450489.1-201ENST00000612071 468 ntBASIC6.94□□□□□ -1.3
ATG4DQ86TL0 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms