Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
LHX1P48742 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LHX1P48742 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
LHX1P48742 RN7SKP250-201ENST00000363924 321 ntBASIC6.96□□□□□ -1.3
LHX1P48742 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.96□□□□□ -1.3
LHX1P48742 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LHX1P48742 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.96□□□□□ -1.3
LHX1P48742 THEM7P-201ENST00000419556 672 ntBASIC6.96□□□□□ -1.3
LHX1P48742 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.96□□□□□ -1.3
LHX1P48742 AC083862.1-201ENST00000427378 1242 ntBASIC6.96□□□□□ -1.3
LHX1P48742 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.96□□□□□ -1.3
LHX1P48742 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.96□□□□□ -1.3
LHX1P48742 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.96□□□□□ -1.3
LHX1P48742 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LHX1P48742 AC236972.4-201ENST00000458091 963 ntBASIC6.96□□□□□ -1.3
LHX1P48742 RN7SL568P-201ENST00000493069 298 ntBASIC6.96□□□□□ -1.3
LHX1P48742 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.96□□□□□ -1.3
LHX1P48742 AC018645.1-201ENST00000505003 109 ntBASIC6.96□□□□□ -1.3
LHX1P48742 SUMO2P7-201ENST00000511179 285 ntBASIC6.96□□□□□ -1.3
LHX1P48742 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.96□□□□□ -1.3
LHX1P48742 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.96□□□□□ -1.3
LHX1P48742 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.96□□□□□ -1.3
LHX1P48742 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.96□□□□□ -1.3
LHX1P48742 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC6.96□□□□□ -1.3
LHX1P48742 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.96□□□□□ -1.3
LHX1P48742 AL359704.2-201ENST00000604335 521 ntBASIC6.96□□□□□ -1.3
LHX1P48742 AC013731.1-201ENST00000604340 883 ntBASIC6.96□□□□□ -1.3
LHX1P48742 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.96□□□□□ -1.3
LHX1P48742 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.96□□□□□ -1.3
LHX1P48742 AP001264.1-201ENST00000620602 703 ntBASIC6.96□□□□□ -1.3
LHX1P48742 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.96□□□□□ -1.3
LHX1P48742 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.96□□□□□ -1.3
LHX1P48742 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LHX1P48742 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.96□□□□□ -1.3
LHX1P48742 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LHX1P48742 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LHX1P48742 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
LHX1P48742 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
LHX1P48742 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
LHX1P48742 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LHX1P48742 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
LHX1P48742 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.96□□□□□ -1.3
LHX1P48742 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC6.96□□□□□ -1.3
LHX1P48742 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LHX1P48742 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LHX1P48742 AC105114.1-201ENST00000624795 1862 ntBASIC6.96□□□□□ -1.3
LHX1P48742 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LHX1P48742 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.96□□□□□ -1.3
LHX1P48742 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LHX1P48742 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LHX1P48742 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LHX1P48742 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LHX1P48742 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
LHX1P48742 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LHX1P48742 ZNF969P-201ENST00000510345 2341 ntBASIC6.95□□□□□ -1.3
LHX1P48742 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LHX1P48742 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.95□□□□□ -1.3
LHX1P48742 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
LHX1P48742 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LHX1P48742 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LHX1P48742 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.95□□□□□ -1.3
LHX1P48742 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
LHX1P48742 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LHX1P48742 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LHX1P48742 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LHX1P48742 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LHX1P48742 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
LHX1P48742 PRELID1P1-201ENST00000403549 660 ntBASIC6.95□□□□□ -1.3
LHX1P48742 RPL23AP85-201ENST00000421838 433 ntBASIC6.95□□□□□ -1.3
LHX1P48742 AC003989.1-201ENST00000434569 565 ntBASIC6.95□□□□□ -1.3
LHX1P48742 RPL29P23-201ENST00000486188 442 ntBASIC6.95□□□□□ -1.3
LHX1P48742 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.95□□□□□ -1.3
LHX1P48742 AL117692.1-201ENST00000494283 713 ntBASIC6.95□□□□□ -1.3
LHX1P48742 AC117500.1-201ENST00000497352 755 ntBASIC6.95□□□□□ -1.3
LHX1P48742 AC135983.3-201ENST00000528049 1226 ntBASIC6.95□□□□□ -1.3
LHX1P48742 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LHX1P48742 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.95□□□□□ -1.3
LHX1P48742 AC063977.7-201ENST00000594454 337 ntBASIC6.95□□□□□ -1.3
LHX1P48742 AL157899.1-201ENST00000604110 936 ntBASIC6.95□□□□□ -1.3
LHX1P48742 AC012676.3-201ENST00000614983 479 ntBASIC6.95□□□□□ -1.3
LHX1P48742 OR8A1-204ENST00000642111 1145 ntBASIC6.95□□□□□ -1.3
LHX1P48742 AC062022.1-201ENST00000451026 1684 ntBASIC6.95□□□□□ -1.3
LHX1P48742 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LHX1P48742 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
LHX1P48742 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LHX1P48742 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LHX1P48742 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LHX1P48742 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
LHX1P48742 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.95□□□□□ -1.3
LHX1P48742 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LHX1P48742 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LHX1P48742 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
LHX1P48742 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
LHX1P48742 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
LHX1P48742 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
LHX1P48742 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
LHX1P48742 NCOA4P3-201ENST00000513203 1877 ntBASIC6.94□□□□□ -1.3
LHX1P48742 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
LHX1P48742 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
LHX1P48742 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms