Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL354718.1-201ENST00000619764 589 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 AC073592.6-201ENST00000624271 415 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-DOAP06340 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-DOAP06340 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-DOAP06340 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-DOAP06340 USP13-203ENST00000496897 2747 ntTSL 2 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 AC124045.1-201ENST00000606008 1953 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-DOAP06340 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-DOAP06340 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 TATDN2P3-201ENST00000452855 3665 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 MIR541-201ENST00000401360 84 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 RPL5P20-201ENST00000403848 896 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC013410.2-201ENST00000422627 201 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 VDAC1P2-201ENST00000423609 850 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC099782.1-201ENST00000425889 474 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 BTBD7P2-201ENST00000441962 620 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC068491.1-201ENST00000449539 1241 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 AL390728.3-201ENST00000452704 270 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 RN7SL552P-201ENST00000462094 276 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC011853.1-201ENST00000518911 454 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 CYCSP25-201ENST00000525280 316 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 AL356986.1-201ENST00000604085 341 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 SNORD91A-202ENST00000609620 191 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 AL162574.2-201ENST00000614618 657 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 FGG-201ENST00000336098 1659 ntTSL 2 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 TMCC1P1-201ENST00000518897 1980 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
HLA-DOAP06340 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
HLA-DOAP06340 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-DOAP06340 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
HLA-DOAP06340 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-DOAP06340 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-DOAP06340 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC7.77□□□□□ -1.17
HLA-DOAP06340 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.77□□□□□ -1.17
HLA-DOAP06340 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-DOAP06340 AC003045.1-201ENST00000398779 713 ntBASIC7.77□□□□□ -1.17
HLA-DOAP06340 RANP7-201ENST00000418085 644 ntBASIC7.77□□□□□ -1.17
HLA-DOAP06340 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC7.77□□□□□ -1.17
HLA-DOAP06340 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms