Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL354718.1-201ENST00000619764 589 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 AC073592.6-201ENST00000624271 415 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-DOAP06340 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-DOAP06340 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-DOAP06340 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-DOAP06340 USP13-203ENST00000496897 2747 ntTSL 2 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 AC124045.1-201ENST00000606008 1953 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-DOAP06340 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-DOAP06340 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 TATDN2P3-201ENST00000452855 3665 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 MIR541-201ENST00000401360 84 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 RPL5P20-201ENST00000403848 896 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC013410.2-201ENST00000422627 201 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 VDAC1P2-201ENST00000423609 850 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC099782.1-201ENST00000425889 474 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 BTBD7P2-201ENST00000441962 620 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC068491.1-201ENST00000449539 1241 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 AL390728.3-201ENST00000452704 270 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 RN7SL552P-201ENST00000462094 276 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC011853.1-201ENST00000518911 454 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 CYCSP25-201ENST00000525280 316 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 AL356986.1-201ENST00000604085 341 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 SNORD91A-202ENST00000609620 191 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 AL162574.2-201ENST00000614618 657 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 FGG-201ENST00000336098 1659 ntTSL 2 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 TMCC1P1-201ENST00000518897 1980 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
HLA-DOAP06340 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.78□□□□□ -1.16
HLA-DOAP06340 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
HLA-DOAP06340 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
HLA-DOAP06340 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
HLA-DOAP06340 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-DOAP06340 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
HLA-DOAP06340 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-DOAP06340 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-DOAP06340 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC7.77□□□□□ -1.17
HLA-DOAP06340 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.77□□□□□ -1.17
HLA-DOAP06340 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
HLA-DOAP06340 AC003045.1-201ENST00000398779 713 ntBASIC7.77□□□□□ -1.17
HLA-DOAP06340 RANP7-201ENST00000418085 644 ntBASIC7.77□□□□□ -1.17
HLA-DOAP06340 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC7.77□□□□□ -1.17
HLA-DOAP06340 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms