Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SCN2BO60939 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.22□□□□□ -1.41
SCN2BO60939 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SCN2BO60939 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.22□□□□□ -1.41
SCN2BO60939 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.22□□□□□ -1.41
SCN2BO60939 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SCN2BO60939 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.22□□□□□ -1.41
SCN2BO60939 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SCN2BO60939 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.22□□□□□ -1.41
SCN2BO60939 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SCN2BO60939 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SCN2BO60939 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SCN2BO60939 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SCN2BO60939 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SCN2BO60939 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
SCN2BO60939 RNA5SP429-201ENST00000363688 109 ntBASIC6.22□□□□□ -1.41
SCN2BO60939 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SCN2BO60939 RN7SKP117-201ENST00000410175 264 ntBASIC6.22□□□□□ -1.41
SCN2BO60939 RPL18AP14-201ENST00000417685 526 ntBASIC6.22□□□□□ -1.41
SCN2BO60939 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.22□□□□□ -1.41
SCN2BO60939 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.22□□□□□ -1.41
SCN2BO60939 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SCN2BO60939 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.22□□□□□ -1.41
SCN2BO60939 SCDP1-201ENST00000455244 1081 ntBASIC6.22□□□□□ -1.41
SCN2BO60939 CCNJP2-201ENST00000457810 1163 ntBASIC6.22□□□□□ -1.41
SCN2BO60939 RPSAP24-201ENST00000461543 873 ntBASIC6.22□□□□□ -1.41
SCN2BO60939 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.22□□□□□ -1.41
SCN2BO60939 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.22□□□□□ -1.41
SCN2BO60939 AC073916.1-201ENST00000545095 130 ntBASIC6.22□□□□□ -1.41
SCN2BO60939 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.22□□□□□ -1.41
SCN2BO60939 ANP32BP1-202ENST00000568553 737 ntBASIC6.22□□□□□ -1.41
SCN2BO60939 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.22□□□□□ -1.41
SCN2BO60939 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.22□□□□□ -1.41
SCN2BO60939 AC245052.7-201ENST00000601161 359 ntBASIC6.22□□□□□ -1.41
SCN2BO60939 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.22□□□□□ -1.41
SCN2BO60939 MRPL57P3-201ENST00000619218 176 ntBASIC6.22□□□□□ -1.41
SCN2BO60939 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.22□□□□□ -1.41
SCN2BO60939 AP001264.1-201ENST00000620602 703 ntBASIC6.22□□□□□ -1.41
SCN2BO60939 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SCN2BO60939 AL121936.2-201ENST00000641935 662 ntBASIC6.22□□□□□ -1.41
SCN2BO60939 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SCN2BO60939 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SCN2BO60939 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.22□□□□□ -1.41
SCN2BO60939 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
SCN2BO60939 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SCN2BO60939 AL161901.1-201ENST00000624954 3425 ntBASIC6.22□□□□□ -1.41
SCN2BO60939 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.22□□□□□ -1.41
SCN2BO60939 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
SCN2BO60939 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.22□□□□□ -1.41
SCN2BO60939 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.21□□□□□ -1.41
SCN2BO60939 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.21□□□□□ -1.41
SCN2BO60939 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SCN2BO60939 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
SCN2BO60939 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.21□□□□□ -1.41
SCN2BO60939 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SCN2BO60939 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SCN2BO60939 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SCN2BO60939 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SCN2BO60939 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SCN2BO60939 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SCN2BO60939 TMCC1P1-201ENST00000518897 1980 ntBASIC6.21□□□□□ -1.42
SCN2BO60939 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SCN2BO60939 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
SCN2BO60939 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.21□□□□□ -1.42
SCN2BO60939 RPLP1P10-201ENST00000413972 339 ntBASIC6.21□□□□□ -1.42
SCN2BO60939 RPL23AP18-201ENST00000416139 468 ntBASIC6.21□□□□□ -1.42
SCN2BO60939 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.21□□□□□ -1.42
SCN2BO60939 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.21□□□□□ -1.42
SCN2BO60939 GAPDHP20-201ENST00000444107 1007 ntBASIC6.21□□□□□ -1.42
SCN2BO60939 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.21□□□□□ -1.42
SCN2BO60939 MGAT2P1-201ENST00000449718 797 ntBASIC6.21□□□□□ -1.42
SCN2BO60939 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.21□□□□□ -1.42
SCN2BO60939 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC6.21□□□□□ -1.42
SCN2BO60939 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.21□□□□□ -1.42
SCN2BO60939 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.21□□□□□ -1.42
SCN2BO60939 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SCN2BO60939 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.21□□□□□ -1.42
SCN2BO60939 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.21□□□□□ -1.42
SCN2BO60939 AC091133.5-201ENST00000603088 301 ntBASIC6.21□□□□□ -1.42
SCN2BO60939 AL512413.1-201ENST00000606489 382 ntBASIC6.21□□□□□ -1.42
SCN2BO60939 AC097641.3-201ENST00000613523 464 ntBASIC6.21□□□□□ -1.42
SCN2BO60939 AC116165.3-201ENST00000614524 400 ntBASIC6.21□□□□□ -1.42
SCN2BO60939 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.21□□□□□ -1.42
SCN2BO60939 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.21□□□□□ -1.42
SCN2BO60939 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SCN2BO60939 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SCN2BO60939 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SCN2BO60939 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
SCN2BO60939 AC095038.1-201ENST00000429248 1591 ntBASIC6.21□□□□□ -1.42
SCN2BO60939 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SCN2BO60939 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SCN2BO60939 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
SCN2BO60939 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SCN2BO60939 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SCN2BO60939 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SCN2BO60939 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SCN2BO60939 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SCN2BO60939 AL355377.1-201ENST00000621125 1653 ntBASIC6.2□□□□□ -1.42
SCN2BO60939 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.2□□□□□ -1.42
SCN2BO60939 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms