Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC9.36□□□□□ -0.91
USP35Q9P2H5 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC9.36□□□□□ -0.91
USP35Q9P2H5 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC9.36□□□□□ -0.91
USP35Q9P2H5 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
USP35Q9P2H5 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC9.36□□□□□ -0.91
USP35Q9P2H5 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
USP35Q9P2H5 RN7SKP174-201ENST00000363803 330 ntBASIC9.36□□□□□ -0.91
USP35Q9P2H5 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
USP35Q9P2H5 AL139806.1-201ENST00000403057 1002 ntBASIC9.36□□□□□ -0.91
USP35Q9P2H5 AL139039.2-201ENST00000407436 479 ntBASIC9.36□□□□□ -0.91
USP35Q9P2H5 RNA5SP431-201ENST00000410312 120 ntBASIC9.36□□□□□ -0.91
USP35Q9P2H5 PSMD10P2-201ENST00000432890 672 ntBASIC9.36□□□□□ -0.91
USP35Q9P2H5 ARMC4P1-201ENST00000438905 707 ntBASIC9.36□□□□□ -0.91
USP35Q9P2H5 IGKV1OR10-1-201ENST00000442306 329 ntBASIC9.36□□□□□ -0.91
USP35Q9P2H5 GAPDHP37-201ENST00000442317 968 ntBASIC9.36□□□□□ -0.91
USP35Q9P2H5 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC9.36□□□□□ -0.91
USP35Q9P2H5 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC9.36□□□□□ -0.91
USP35Q9P2H5 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC9.36□□□□□ -0.91
USP35Q9P2H5 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC9.36□□□□□ -0.91
USP35Q9P2H5 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC9.36□□□□□ -0.91
USP35Q9P2H5 MTND2P3-201ENST00000452458 470 ntBASIC9.36□□□□□ -0.91
USP35Q9P2H5 AKR1D1P1-201ENST00000457236 936 ntBASIC9.36□□□□□ -0.91
USP35Q9P2H5 IGKV1OR22-5-201ENST00000458718 354 ntBASIC9.36□□□□□ -0.91
USP35Q9P2H5 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC9.36□□□□□ -0.91
USP35Q9P2H5 UGT2A3P7-201ENST00000510485 734 ntBASIC9.36□□□□□ -0.91
USP35Q9P2H5 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC9.36□□□□□ -0.91
USP35Q9P2H5 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC9.36□□□□□ -0.91
USP35Q9P2H5 AC027667.1-201ENST00000545814 304 ntBASIC9.36□□□□□ -0.91
USP35Q9P2H5 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
USP35Q9P2H5 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC9.36□□□□□ -0.91
USP35Q9P2H5 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC9.36□□□□□ -0.91
USP35Q9P2H5 RN7SL230P-201ENST00000580835 303 ntBASIC9.36□□□□□ -0.91
USP35Q9P2H5 AC005726.4-201ENST00000582858 458 ntBASIC9.36□□□□□ -0.91
USP35Q9P2H5 AC015801.1-201ENST00000585651 153 ntBASIC9.36□□□□□ -0.91
USP35Q9P2H5 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
USP35Q9P2H5 AC068802.1-201ENST00000603420 732 ntBASIC9.36□□□□□ -0.91
USP35Q9P2H5 AL513218.1-201ENST00000606527 391 ntBASIC9.36□□□□□ -0.91
USP35Q9P2H5 AL121583.1-201ENST00000612444 682 ntBASIC9.36□□□□□ -0.91
USP35Q9P2H5 MIR6721-201ENST00000617181 87 ntBASIC9.36□□□□□ -0.91
USP35Q9P2H5 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
USP35Q9P2H5 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC9.36□□□□□ -0.91
USP35Q9P2H5 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
USP35Q9P2H5 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC9.36□□□□□ -0.91
USP35Q9P2H5 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC9.36□□□□□ -0.91
USP35Q9P2H5 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
USP35Q9P2H5 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
USP35Q9P2H5 OR4C1P-202ENST00000641065 1569 ntBASIC9.36□□□□□ -0.91
USP35Q9P2H5 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
USP35Q9P2H5 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
USP35Q9P2H5 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
USP35Q9P2H5 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC9.36□□□□□ -0.91
USP35Q9P2H5 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
USP35Q9P2H5 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
USP35Q9P2H5 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
USP35Q9P2H5 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
USP35Q9P2H5 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
USP35Q9P2H5 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
USP35Q9P2H5 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
USP35Q9P2H5 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC9.35□□□□□ -0.91
USP35Q9P2H5 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
USP35Q9P2H5 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
USP35Q9P2H5 OR6R1P-201ENST00000431838 940 ntBASIC9.35□□□□□ -0.91
USP35Q9P2H5 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
USP35Q9P2H5 AC135999.1-201ENST00000478962 479 ntBASIC9.35□□□□□ -0.91
USP35Q9P2H5 AP002884.1-201ENST00000479691 655 ntBASIC9.35□□□□□ -0.91
USP35Q9P2H5 AC005017.1-201ENST00000482002 490 ntBASIC9.35□□□□□ -0.91
USP35Q9P2H5 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC9.35□□□□□ -0.91
USP35Q9P2H5 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC9.35□□□□□ -0.91
USP35Q9P2H5 AC090568.1-201ENST00000509499 856 ntBASIC9.35□□□□□ -0.91
USP35Q9P2H5 AC018797.1-201ENST00000510791 255 ntBASIC9.35□□□□□ -0.91
USP35Q9P2H5 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC9.35□□□□□ -0.91
USP35Q9P2H5 IGHV7-34-1-201ENST00000519200 350 ntBASIC9.35□□□□□ -0.91
USP35Q9P2H5 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC9.35□□□□□ -0.91
USP35Q9P2H5 TRIM51DP-201ENST00000529746 596 ntBASIC9.35□□□□□ -0.91
USP35Q9P2H5 AC084121.1-201ENST00000533882 835 ntBASIC9.35□□□□□ -0.91
USP35Q9P2H5 AC139493.1-201ENST00000604368 397 ntBASIC9.35□□□□□ -0.91
USP35Q9P2H5 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
USP35Q9P2H5 UOX-205ENST00000640983 544 ntTSL 4 BASIC9.35□□□□□ -0.91
USP35Q9P2H5 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
USP35Q9P2H5 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
USP35Q9P2H5 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC9.35□□□□□ -0.91
USP35Q9P2H5 AC102941.1-201ENST00000567616 1537 ntBASIC9.35□□□□□ -0.91
USP35Q9P2H5 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
USP35Q9P2H5 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
USP35Q9P2H5 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
USP35Q9P2H5 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
USP35Q9P2H5 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC9.34□□□□□ -0.91
USP35Q9P2H5 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC9.34□□□□□ -0.91
USP35Q9P2H5 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC9.34□□□□□ -0.91
USP35Q9P2H5 ATP5BP1-201ENST00000411980 1574 ntBASIC9.34□□□□□ -0.91
USP35Q9P2H5 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
USP35Q9P2H5 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
USP35Q9P2H5 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC9.34□□□□□ -0.91
USP35Q9P2H5 AL117339.4-201ENST00000608335 7063 ntBASIC9.34□□□□□ -0.91
USP35Q9P2H5 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
USP35Q9P2H5 OR7A2P-201ENST00000304105 930 ntBASIC9.34□□□□□ -0.91
USP35Q9P2H5 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
USP35Q9P2H5 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
USP35Q9P2H5 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
USP35Q9P2H5 AL359715.1-201ENST00000404330 555 ntBASIC9.34□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms