Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 GPRC5D-AS1-202ENST00000499948 1746 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CHD8Q9HCK8 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.09□□□□□ -1.43
CHD8Q9HCK8 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHD8Q9HCK8 ZBTB43-201ENST00000373457 5695 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CHD8Q9HCK8 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHD8Q9HCK8 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CHD8Q9HCK8 AC023245.2-201ENST00000530760 2978 ntBASIC6.09□□□□□ -1.43
CHD8Q9HCK8 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CHD8Q9HCK8 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHD8Q9HCK8 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC6.09□□□□□ -1.43
CHD8Q9HCK8 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHD8Q9HCK8 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CHD8Q9HCK8 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHD8Q9HCK8 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHD8Q9HCK8 RNA5SP46-201ENST00000362370 120 ntBASIC6.09□□□□□ -1.43
CHD8Q9HCK8 AL354890.1-201ENST00000413730 346 ntBASIC6.09□□□□□ -1.43
CHD8Q9HCK8 AL139128.1-201ENST00000413921 941 ntBASIC6.09□□□□□ -1.43
CHD8Q9HCK8 EMC3-AS1-205ENST00000438698 534 ntBASIC6.09□□□□□ -1.43
CHD8Q9HCK8 TDGF1P1-201ENST00000445734 527 ntBASIC6.09□□□□□ -1.43
CHD8Q9HCK8 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.09□□□□□ -1.43
CHD8Q9HCK8 BX284632.1-201ENST00000478218 541 ntBASIC6.09□□□□□ -1.43
CHD8Q9HCK8 AC068587.1-201ENST00000483613 781 ntBASIC6.09□□□□□ -1.43
CHD8Q9HCK8 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.09□□□□□ -1.43
CHD8Q9HCK8 CYP1A1-205ENST00000564596 988 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CHD8Q9HCK8 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.09□□□□□ -1.43
CHD8Q9HCK8 KARSP2-201ENST00000415696 1639 ntBASIC6.09□□□□□ -1.43
CHD8Q9HCK8 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
CHD8Q9HCK8 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CHD8Q9HCK8 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC6.09□□□□□ -1.43
CHD8Q9HCK8 NAIP-208ENST00000517649 6124 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHD8Q9HCK8 SYNPO2-204ENST00000448416 4298 ntTSL 2 BASIC6.09□□□□□ -1.43
CHD8Q9HCK8 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.09□□□□□ -1.44
CHD8Q9HCK8 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
CHD8Q9HCK8 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CHD8Q9HCK8 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.09□□□□□ -1.44
CHD8Q9HCK8 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CHD8Q9HCK8 RPS16P5-201ENST00000406501 404 ntBASIC6.09□□□□□ -1.44
CHD8Q9HCK8 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.09□□□□□ -1.44
CHD8Q9HCK8 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.09□□□□□ -1.44
CHD8Q9HCK8 AC093155.2-201ENST00000420734 937 ntBASIC6.09□□□□□ -1.44
CHD8Q9HCK8 AC130360.1-201ENST00000425489 1117 ntBASIC6.09□□□□□ -1.44
CHD8Q9HCK8 AL359076.1-201ENST00000426860 420 ntTSL 3 BASIC6.09□□□□□ -1.44
CHD8Q9HCK8 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.09□□□□□ -1.44
CHD8Q9HCK8 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
CHD8Q9HCK8 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.09□□□□□ -1.44
CHD8Q9HCK8 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.09□□□□□ -1.44
CHD8Q9HCK8 AC130365.2-201ENST00000525882 1201 ntBASIC6.09□□□□□ -1.44
CHD8Q9HCK8 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.09□□□□□ -1.44
CHD8Q9HCK8 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.09□□□□□ -1.44
CHD8Q9HCK8 AC008055.1-201ENST00000547032 609 ntBASIC6.09□□□□□ -1.44
CHD8Q9HCK8 AC092121.1-201ENST00000569452 202 ntBASIC6.09□□□□□ -1.44
CHD8Q9HCK8 LINC02495-203ENST00000636704 242 ntBASIC6.09□□□□□ -1.44
CHD8Q9HCK8 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CHD8Q9HCK8 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
CHD8Q9HCK8 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC6.09□□□□□ -1.44
CHD8Q9HCK8 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
CHD8Q9HCK8 AC027279.4-201ENST00000624371 2072 ntBASIC6.08□□□□□ -1.44
CHD8Q9HCK8 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 AC018765.1-201ENST00000623357 3446 ntBASIC6.08□□□□□ -1.44
CHD8Q9HCK8 SEMA3E-202ENST00000427262 2414 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 AC016582.1-202ENST00000636341 2982 ntBASIC6.08□□□□□ -1.44
CHD8Q9HCK8 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 R3HDM2P1-201ENST00000505381 1960 ntBASIC6.08□□□□□ -1.44
CHD8Q9HCK8 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 AC068733.1-202ENST00000531479 2456 ntBASIC6.08□□□□□ -1.44
CHD8Q9HCK8 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 AL590762.4-201ENST00000425885 253 ntBASIC6.08□□□□□ -1.44
CHD8Q9HCK8 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 AL161937.1-202ENST00000451960 341 ntTSL 3 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 EEF1B2P2-201ENST00000519625 676 ntBASIC6.08□□□□□ -1.44
CHD8Q9HCK8 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 AC108673.3-201ENST00000609183 335 ntBASIC6.08□□□□□ -1.44
CHD8Q9HCK8 AC096708.4-201ENST00000620563 552 ntBASIC6.08□□□□□ -1.44
CHD8Q9HCK8 OR8G3P-202ENST00000641572 1255 ntBASIC6.08□□□□□ -1.44
CHD8Q9HCK8 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 AC023421.1-201ENST00000590535 1785 ntBASIC6.08□□□□□ -1.44
CHD8Q9HCK8 AL096816.1-201ENST00000623300 2920 ntBASIC6.08□□□□□ -1.44
CHD8Q9HCK8 MAPK8-205ENST00000374182 5638 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 OVCH1-201ENST00000318184 3405 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 MBTD1-203ENST00000415868 5099 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CHD8Q9HCK8 AC078795.1-201ENST00000602342 3143 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms