Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
COL15A1P39059 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
COL15A1P39059 RN7SKP78-201ENST00000364711 318 ntBASIC8.31□□□□□ -1.08
COL15A1P39059 AC004386.1-201ENST00000393214 761 ntBASIC8.31□□□□□ -1.08
COL15A1P39059 AC017035.1-201ENST00000411999 1115 ntBASIC8.31□□□□□ -1.08
COL15A1P39059 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC8.31□□□□□ -1.08
COL15A1P39059 EMC3-AS1-205ENST00000438698 534 ntBASIC8.31□□□□□ -1.08
COL15A1P39059 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC8.31□□□□□ -1.08
COL15A1P39059 AC084754.1-201ENST00000463466 464 ntBASIC8.31□□□□□ -1.08
COL15A1P39059 AP002453.1-201ENST00000492327 668 ntBASIC8.31□□□□□ -1.08
COL15A1P39059 RNA5SP206-201ENST00000516703 121 ntBASIC8.31□□□□□ -1.08
COL15A1P39059 RN7SKP35-201ENST00000517210 151 ntBASIC8.31□□□□□ -1.08
COL15A1P39059 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
COL15A1P39059 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
COL15A1P39059 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC8.31□□□□□ -1.08
COL15A1P39059 AL096712.1-201ENST00000614561 159 ntBASIC8.31□□□□□ -1.08
COL15A1P39059 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC8.31□□□□□ -1.08
COL15A1P39059 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC8.31□□□□□ -1.08
COL15A1P39059 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC8.31□□□□□ -1.08
COL15A1P39059 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
COL15A1P39059 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
COL15A1P39059 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
COL15A1P39059 NEK2P4-201ENST00000425793 1329 ntBASIC8.31□□□□□ -1.08
COL15A1P39059 AL512310.3-201ENST00000547023 1335 ntBASIC8.31□□□□□ -1.08
COL15A1P39059 AC119674.1-204ENST00000641348 1343 ntBASIC8.31□□□□□ -1.08
COL15A1P39059 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
COL15A1P39059 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
COL15A1P39059 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
COL15A1P39059 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC8.31□□□□□ -1.08
COL15A1P39059 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC8.31□□□□□ -1.08
COL15A1P39059 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
COL15A1P39059 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
COL15A1P39059 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC8.3□□□□□ -1.08
COL15A1P39059 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
COL15A1P39059 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC8.3□□□□□ -1.08
COL15A1P39059 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
COL15A1P39059 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
COL15A1P39059 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
COL15A1P39059 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
COL15A1P39059 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
COL15A1P39059 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
COL15A1P39059 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
COL15A1P39059 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
COL15A1P39059 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
COL15A1P39059 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
COL15A1P39059 LCN1P2-201ENST00000372030 223 ntBASIC8.3□□□□□ -1.08
COL15A1P39059 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
COL15A1P39059 AL157702.1-201ENST00000398764 426 ntBASIC8.3□□□□□ -1.08
COL15A1P39059 MIR541-201ENST00000401360 84 ntBASIC8.3□□□□□ -1.08
COL15A1P39059 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC8.3□□□□□ -1.08
COL15A1P39059 CYCSP52-201ENST00000422857 310 ntBASIC8.3□□□□□ -1.08
COL15A1P39059 AC009963.3-201ENST00000458090 486 ntBASIC8.3□□□□□ -1.08
COL15A1P39059 RPL23AP64-201ENST00000469465 435 ntBASIC8.3□□□□□ -1.08
COL15A1P39059 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC8.3□□□□□ -1.08
COL15A1P39059 RPL23AP68-201ENST00000480924 445 ntBASIC8.3□□□□□ -1.08
COL15A1P39059 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC8.3□□□□□ -1.08
COL15A1P39059 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC8.3□□□□□ -1.08
COL15A1P39059 IGLVIV-64-201ENST00000518581 301 ntBASIC8.3□□□□□ -1.08
COL15A1P39059 IGKV3D-25-201ENST00000519599 235 ntBASIC8.3□□□□□ -1.08
COL15A1P39059 COX6B1P4-201ENST00000519826 484 ntBASIC8.3□□□□□ -1.08
COL15A1P39059 FAU-203ENST00000525297 355 ntTSL 5 BASIC8.3□□□□□ -1.08
COL15A1P39059 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC8.3□□□□□ -1.08
COL15A1P39059 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC8.3□□□□□ -1.08
COL15A1P39059 NANOGNBP2-201ENST00000544753 553 ntBASIC8.3□□□□□ -1.08
COL15A1P39059 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC8.3□□□□□ -1.08
COL15A1P39059 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC8.3□□□□□ -1.08
COL15A1P39059 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC8.3□□□□□ -1.08
COL15A1P39059 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC8.3□□□□□ -1.08
COL15A1P39059 AL080312.2-201ENST00000613001 630 ntBASIC8.3□□□□□ -1.08
COL15A1P39059 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
COL15A1P39059 AL512356.3-201ENST00000623005 461 ntBASIC8.3□□□□□ -1.08
COL15A1P39059 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
COL15A1P39059 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
COL15A1P39059 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
COL15A1P39059 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
COL15A1P39059 EEF1A1P12-201ENST00000443590 1346 ntBASIC8.3□□□□□ -1.08
COL15A1P39059 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
COL15A1P39059 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
COL15A1P39059 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
COL15A1P39059 FO393409.1-201ENST00000399325 1372 ntBASIC8.3□□□□□ -1.08
COL15A1P39059 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
COL15A1P39059 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
COL15A1P39059 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
COL15A1P39059 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC8.29□□□□□ -1.08
COL15A1P39059 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
COL15A1P39059 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
COL15A1P39059 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
COL15A1P39059 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC8.29□□□□□ -1.08
COL15A1P39059 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC8.29□□□□□ -1.08
COL15A1P39059 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
COL15A1P39059 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
COL15A1P39059 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
COL15A1P39059 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC8.29□□□□□ -1.08
COL15A1P39059 AC079777.1-201ENST00000623836 1953 ntBASIC8.29□□□□□ -1.08
COL15A1P39059 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC8.29□□□□□ -1.08
COL15A1P39059 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
COL15A1P39059 MAPK10-371ENST00000641952 5209 ntBASIC8.29□□□□□ -1.08
COL15A1P39059 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
COL15A1P39059 COX6B1P3-201ENST00000312310 260 ntBASIC8.29□□□□□ -1.08
COL15A1P39059 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms