Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 SNRPBP1-201ENST00000443634 282 ntBASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 AKR1D1P1-201ENST00000457236 936 ntBASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 AC236972.4-201ENST00000458091 963 ntBASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 AC012175.1-201ENST00000603755 531 ntBASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 AL008582.1-201ENST00000609612 442 ntBASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 AL133243.4-201ENST00000623116 3109 ntBASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 AC119674.1-204ENST00000641348 1343 ntBASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 TATDN2P3-201ENST00000452855 3665 ntBASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NPIPA1Q9UND3 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 MAPK10-379ENST00000642013 1385 ntBASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 RNA5SP65-201ENST00000363166 119 ntBASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 RN7SKP171-201ENST00000364417 303 ntBASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 PPIAP26-201ENST00000377951 522 ntBASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 MIR541-201ENST00000401360 84 ntBASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 THEM7P-201ENST00000419556 672 ntBASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 AL139184.1-202ENST00000422303 222 ntBASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 AL590128.1-201ENST00000433407 286 ntBASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 AC128677.1-201ENST00000436016 442 ntBASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 GAPDHP20-201ENST00000444107 1007 ntBASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 AC023310.2-201ENST00000553844 547 ntBASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 SNORA70D-201ENST00000578836 135 ntBASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 AL590032.1-201ENST00000604920 252 ntBASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 AC004908.1-201ENST00000606572 541 ntBASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 AC005828.7-201ENST00000607331 556 ntBASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 AC016590.3-201ENST00000611171 753 ntBASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 AC006328.2-201ENST00000623198 397 ntBASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 AC012005.2-201ENST00000624333 397 ntBASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 AC241584.2-201ENST00000637142 2090 ntBASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NPIPA1Q9UND3 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA1Q9UND3 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms