Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 RPS10P21-201ENST00000430654 475 ntBASIC6.84□□□□□ -1.31
PCDH9Q9HC56 RPS19P6-201ENST00000441327 433 ntBASIC6.84□□□□□ -1.31
PCDH9Q9HC56 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.84□□□□□ -1.31
PCDH9Q9HC56 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDH9Q9HC56 AC010442.1-201ENST00000515583 816 ntBASIC6.84□□□□□ -1.31
PCDH9Q9HC56 RNA5SP96-201ENST00000516041 107 ntBASIC6.84□□□□□ -1.31
PCDH9Q9HC56 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC6.84□□□□□ -1.31
PCDH9Q9HC56 AC022616.2-201ENST00000523185 300 ntBASIC6.84□□□□□ -1.31
PCDH9Q9HC56 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDH9Q9HC56 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDH9Q9HC56 AC089984.3-201ENST00000552838 363 ntBASIC6.84□□□□□ -1.31
PCDH9Q9HC56 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
PCDH9Q9HC56 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDH9Q9HC56 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDH9Q9HC56 AC025171.4-201ENST00000607250 1047 ntBASIC6.84□□□□□ -1.31
PCDH9Q9HC56 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDH9Q9HC56 AC009779.8-201ENST00000641684 4384 ntBASIC6.84□□□□□ -1.31
PCDH9Q9HC56 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDH9Q9HC56 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDH9Q9HC56 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDH9Q9HC56 AC009220.2-201ENST00000489759 1751 ntBASIC6.84□□□□□ -1.31
PCDH9Q9HC56 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDH9Q9HC56 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDH9Q9HC56 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDH9Q9HC56 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.84□□□□□ -1.32
PCDH9Q9HC56 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.84□□□□□ -1.32
PCDH9Q9HC56 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
PCDH9Q9HC56 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.83□□□□□ -1.32
PCDH9Q9HC56 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 AC009831.5-201ENST00000624000 3189 ntBASIC6.83□□□□□ -1.32
PCDH9Q9HC56 API5P1-201ENST00000424316 1510 ntBASIC6.83□□□□□ -1.32
PCDH9Q9HC56 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 AL023284.3-201ENST00000407767 334 ntBASIC6.83□□□□□ -1.32
PCDH9Q9HC56 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 MTCO1P55-201ENST00000489829 745 ntBASIC6.83□□□□□ -1.32
PCDH9Q9HC56 AC093325.1-201ENST00000508378 326 ntBASIC6.83□□□□□ -1.32
PCDH9Q9HC56 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 AP002004.1-206ENST00000532441 876 ntBASIC6.83□□□□□ -1.32
PCDH9Q9HC56 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.83□□□□□ -1.32
PCDH9Q9HC56 TCL6_3.1-201ENST00000619064 137 ntBASIC6.83□□□□□ -1.32
PCDH9Q9HC56 AC091059.2-201ENST00000623355 614 ntBASIC6.83□□□□□ -1.32
PCDH9Q9HC56 AC018692.2-201ENST00000624130 348 ntBASIC6.83□□□□□ -1.32
PCDH9Q9HC56 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH9Q9HC56 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 AC092701.1-201ENST00000623627 1551 ntBASIC6.82□□□□□ -1.32
PCDH9Q9HC56 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 MGAT2P1-201ENST00000449718 797 ntBASIC6.82□□□□□ -1.32
PCDH9Q9HC56 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms