Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 SNX18P3-201ENST00000424993 835 ntBASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 RPL35P8-201ENST00000433284 337 ntBASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 MTND5P13-201ENST00000513046 1079 ntBASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AC010442.1-201ENST00000515583 816 ntBASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 SCARNA20.1-201ENST00000516009 138 ntBASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AP003461.1-201ENST00000528866 78 ntBASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 OR7E96P-201ENST00000530816 976 ntBASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 APEX1-214ENST00000557054 888 ntTSL 5 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 DPRXP4-201ENST00000578053 568 ntBASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AP001496.3-201ENST00000580230 913 ntBASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 OR7A1P-201ENST00000601206 970 ntBASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AL133247.2-201ENST00000603236 482 ntBASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 Z82195.1-201ENST00000604558 398 ntBASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AL021997.1-201ENST00000605757 193 ntBASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 MIR6731-201ENST00000614863 72 ntBASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AC025016.1-201ENST00000616746 682 ntBASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AP003072.4-201ENST00000624580 310 ntBASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 OR7E91P-202ENST00000642062 1198 ntBASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AC013268.3-201ENST00000262716 2324 ntBASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AL357556.1-201ENST00000421884 1388 ntBASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AC130456.1-201ENST00000565085 1363 ntBASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AC123769.2-201ENST00000624332 5984 ntBASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 AP003119.3-201ENST00000566747 4192 ntBASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 ZNF876P-202ENST00000398732 1485 ntBASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC6.28□□□□□ -1.4
SSBP3Q9BWW4 ECM1P2-201ENST00000503354 1577 ntBASIC6.27□□□□□ -1.41
SSBP3Q9BWW4 AC022306.1-201ENST00000560489 1562 ntBASIC6.27□□□□□ -1.41
SSBP3Q9BWW4 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSBP3Q9BWW4 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC6.27□□□□□ -1.41
SSBP3Q9BWW4 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SSBP3Q9BWW4 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSBP3Q9BWW4 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SSBP3Q9BWW4 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC6.27□□□□□ -1.41
SSBP3Q9BWW4 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSBP3Q9BWW4 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
SSBP3Q9BWW4 AL512662.1-201ENST00000624850 2251 ntBASIC6.27□□□□□ -1.41
SSBP3Q9BWW4 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SSBP3Q9BWW4 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SSBP3Q9BWW4 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSBP3Q9BWW4 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SSBP3Q9BWW4 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
SSBP3Q9BWW4 RNU5B-4P-201ENST00000363508 111 ntBASIC6.27□□□□□ -1.41
SSBP3Q9BWW4 RNU6-867P-201ENST00000364956 107 ntBASIC6.27□□□□□ -1.41
SSBP3Q9BWW4 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSBP3Q9BWW4 RNU6-468P-201ENST00000384003 109 ntBASIC6.27□□□□□ -1.41
SSBP3Q9BWW4 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSBP3Q9BWW4 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms