Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 AC019080.2-201ENST00000453859 394 ntBASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 RPSAP48-201ENST00000466509 889 ntBASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 RN7SL182P-201ENST00000496499 300 ntBASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 DCAF13P2-201ENST00000514188 555 ntBASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 SNRPCP20-201ENST00000588011 210 ntBASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 COX6CP16-201ENST00000603667 216 ntBASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 AC005070.2-201ENST00000604391 260 ntBASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 AC012640.3-201ENST00000607847 430 ntBASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC28BQ9BUN5 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 LINC01616-201ENST00000561816 2280 ntBASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 AL355488.2-201ENST00000609909 2850 ntBASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 AC105235.1-201ENST00000623208 1816 ntBASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 OR10D1P-201ENST00000355343 936 ntBASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 U3.23-201ENST00000391132 200 ntBASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 RN7SKP161-201ENST00000411110 305 ntBASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 AC009506.2-201ENST00000420635 840 ntBASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 AC093107.1-201ENST00000422772 609 ntBASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 AC134879.1-201ENST00000426062 394 ntBASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 ST13P2-201ENST00000438916 1109 ntBASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 AC009237.1-201ENST00000442127 744 ntBASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 RPL23AP28-201ENST00000448062 470 ntBASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 AC133965.1-201ENST00000452984 354 ntBASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 CHN2-226ENST00000495789 725 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 EIF3KP1-201ENST00000513279 656 ntBASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 RRM1-AS1-201ENST00000529323 346 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 BUB1P1-201ENST00000603541 607 ntBASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 AL356986.1-201ENST00000604085 341 ntBASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 AC024589.2-201ENST00000605642 1294 ntBASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 AC005725.1-201ENST00000577346 2607 ntBASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 AL049634.1-201ENST00000453770 1720 ntBASIC6.42□□□□□ -1.38
CCDC28BQ9BUN5 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 AC027575.3-201ENST00000583058 2747 ntBASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC28BQ9BUN5 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms