Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 AC011611.6-201ENST00000547483 255 ntBASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 ANP32BP1-202ENST00000568553 737 ntBASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 AL049840.5-201ENST00000602827 552 ntBASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 AL356986.1-201ENST00000604085 341 ntBASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 AC004241.2-201ENST00000614562 444 ntBASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 AC073488.9-201ENST00000631601 754 ntBASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 AP002370.1-201ENST00000528055 1602 ntBASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 AC007342.9-201ENST00000623877 1385 ntBASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC6.56□□□□□ -1.36
ZNF549Q6P9A3 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 Z93929.1-201ENST00000418200 1475 ntBASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AL391261.1-201ENST00000555712 1479 ntBASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AC005332.9-201ENST00000620266 2921 ntBASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 RNA5SP321-201ENST00000362722 111 ntBASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 RN7SKP191-201ENST00000364713 306 ntBASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 RNU1-46P-201ENST00000384425 164 ntBASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 MIR27A-201ENST00000385073 78 ntBASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 MRPL32P1-201ENST00000406301 247 ntBASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AL117344.1-201ENST00000407196 616 ntBASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 HSFY1P1-201ENST00000423928 1178 ntBASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 RSL24D1P2-201ENST00000445584 366 ntBASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AL354872.1-201ENST00000456361 967 ntBASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AC008868.1-201ENST00000509786 737 ntBASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AL390198.2-201ENST00000510553 222 ntBASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 RNA5SP75-201ENST00000516841 111 ntBASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 LDHC-204ENST00000536880 957 ntTSL 5 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AC245052.7-201ENST00000601161 359 ntBASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AL512430.4-201ENST00000603085 613 ntBASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AC091133.5-201ENST00000603088 301 ntBASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AC079414.3-201ENST00000612986 1090 ntBASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AC114546.4-201ENST00000624413 369 ntBASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ZNF549Q6P9A3 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 PARP4P1-201ENST00000435945 2337 ntBASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
ZNF549Q6P9A3 AC011592.1-201ENST00000624647 3634 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms