Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC125603.4-201ENST00000621942 2699 ntBASIC7.88□□□□□ -1.15
PDS5AQ29RF7 AC104581.5-201ENST00000624171 7141 ntBASIC7.88□□□□□ -1.15
PDS5AQ29RF7 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
PDS5AQ29RF7 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
PDS5AQ29RF7 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.88□□□□□ -1.15
PDS5AQ29RF7 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
PDS5AQ29RF7 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
PDS5AQ29RF7 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.88□□□□□ -1.15
PDS5AQ29RF7 MAPK10-365ENST00000641902 3825 ntBASIC7.87□□□□□ -1.15
PDS5AQ29RF7 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
PDS5AQ29RF7 AC062022.1-201ENST00000451026 1684 ntBASIC7.87□□□□□ -1.15
PDS5AQ29RF7 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.87□□□□□ -1.15
PDS5AQ29RF7 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
PDS5AQ29RF7 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
PDS5AQ29RF7 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
PDS5AQ29RF7 RNU1-65P-201ENST00000363919 148 ntBASIC7.87□□□□□ -1.15
PDS5AQ29RF7 RNA5SP232-201ENST00000364144 119 ntBASIC7.87□□□□□ -1.15
PDS5AQ29RF7 RNU1-46P-201ENST00000384425 164 ntBASIC7.87□□□□□ -1.15
PDS5AQ29RF7 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
PDS5AQ29RF7 CXADRP1-201ENST00000398098 1095 ntBASIC7.87□□□□□ -1.15
PDS5AQ29RF7 AC003045.1-201ENST00000398779 713 ntBASIC7.87□□□□□ -1.15
PDS5AQ29RF7 AL139805.1-201ENST00000407837 289 ntBASIC7.87□□□□□ -1.15
PDS5AQ29RF7 AC017035.1-201ENST00000411999 1115 ntBASIC7.87□□□□□ -1.15
PDS5AQ29RF7 VN1R20P-201ENST00000425215 966 ntBASIC7.87□□□□□ -1.15
PDS5AQ29RF7 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC7.87□□□□□ -1.15
PDS5AQ29RF7 RPSAP65-201ENST00000429660 595 ntBASIC7.87□□□□□ -1.15
PDS5AQ29RF7 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
PDS5AQ29RF7 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC7.87□□□□□ -1.15
PDS5AQ29RF7 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.87□□□□□ -1.15
PDS5AQ29RF7 AL139156.3-201ENST00000454802 394 ntBASIC7.87□□□□□ -1.15
PDS5AQ29RF7 AC090142.2-201ENST00000483263 416 ntBASIC7.87□□□□□ -1.15
PDS5AQ29RF7 RN7SL170P-201ENST00000487098 295 ntBASIC7.87□□□□□ -1.15
PDS5AQ29RF7 AC063943.2-201ENST00000495697 534 ntBASIC7.87□□□□□ -1.15
PDS5AQ29RF7 AC113367.2-201ENST00000505749 160 ntBASIC7.87□□□□□ -1.15
PDS5AQ29RF7 APOBEC3AP1-201ENST00000511396 287 ntBASIC7.87□□□□□ -1.15
PDS5AQ29RF7 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.87□□□□□ -1.15
PDS5AQ29RF7 AC008055.1-201ENST00000547032 609 ntBASIC7.87□□□□□ -1.15
PDS5AQ29RF7 AC009729.1-201ENST00000548873 1133 ntBASIC7.87□□□□□ -1.15
PDS5AQ29RF7 SMIM12P1-201ENST00000603004 274 ntBASIC7.87□□□□□ -1.15
PDS5AQ29RF7 CXADRP3-202ENST00000617265 1100 ntBASIC7.87□□□□□ -1.15
PDS5AQ29RF7 MIR6811-201ENST00000620409 58 ntBASIC7.87□□□□□ -1.15
PDS5AQ29RF7 AC073593.1-201ENST00000624500 411 ntBASIC7.87□□□□□ -1.15
PDS5AQ29RF7 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.87□□□□□ -1.15
PDS5AQ29RF7 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
PDS5AQ29RF7 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.87□□□□□ -1.15
PDS5AQ29RF7 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.87□□□□□ -1.15
PDS5AQ29RF7 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
PDS5AQ29RF7 AC007993.1-201ENST00000621298 2430 ntBASIC7.87□□□□□ -1.15
PDS5AQ29RF7 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
PDS5AQ29RF7 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
PDS5AQ29RF7 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.87□□□□□ -1.15
PDS5AQ29RF7 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.86□□□□□ -1.15
PDS5AQ29RF7 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
PDS5AQ29RF7 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.86□□□□□ -1.15
PDS5AQ29RF7 MIR621-201ENST00000384919 96 ntBASIC7.86□□□□□ -1.15
PDS5AQ29RF7 YWHAZP4-201ENST00000392459 708 ntBASIC7.86□□□□□ -1.15
PDS5AQ29RF7 RBBP4P5-201ENST00000398583 1266 ntBASIC7.86□□□□□ -1.15
PDS5AQ29RF7 YWHAZP6-201ENST00000399764 738 ntBASIC7.86□□□□□ -1.15
PDS5AQ29RF7 EMC3-AS1-205ENST00000438698 534 ntBASIC7.86□□□□□ -1.15
PDS5AQ29RF7 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC7.86□□□□□ -1.15
PDS5AQ29RF7 POU5F1P5-201ENST00000445059 658 ntBASIC7.86□□□□□ -1.15
PDS5AQ29RF7 AC104339.1-201ENST00000465478 348 ntBASIC7.86□□□□□ -1.15
PDS5AQ29RF7 GM2AP2-201ENST00000491764 562 ntBASIC7.86□□□□□ -1.15
PDS5AQ29RF7 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC7.86□□□□□ -1.15
PDS5AQ29RF7 RNA5SP418-201ENST00000515951 117 ntBASIC7.86□□□□□ -1.15
PDS5AQ29RF7 Vault.2-201ENST00000516519 98 ntBASIC7.86□□□□□ -1.15
PDS5AQ29RF7 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.86□□□□□ -1.15
PDS5AQ29RF7 AC015818.6-201ENST00000584274 634 ntBASIC7.86□□□□□ -1.15
PDS5AQ29RF7 AL589863.1-201ENST00000595383 631 ntBASIC7.86□□□□□ -1.15
PDS5AQ29RF7 AL359704.2-201ENST00000604335 521 ntBASIC7.86□□□□□ -1.15
PDS5AQ29RF7 AL135999.3-201ENST00000610501 812 ntBASIC7.86□□□□□ -1.15
PDS5AQ29RF7 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
PDS5AQ29RF7 CAP1P2-201ENST00000417455 1409 ntBASIC7.86□□□□□ -1.15
PDS5AQ29RF7 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
PDS5AQ29RF7 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.86□□□□□ -1.15
PDS5AQ29RF7 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
PDS5AQ29RF7 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
PDS5AQ29RF7 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
PDS5AQ29RF7 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
PDS5AQ29RF7 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.86□□□□□ -1.15
PDS5AQ29RF7 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
PDS5AQ29RF7 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
PDS5AQ29RF7 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
PDS5AQ29RF7 AC011592.1-201ENST00000624647 3634 ntBASIC7.86□□□□□ -1.15
PDS5AQ29RF7 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
PDS5AQ29RF7 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
PDS5AQ29RF7 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.85□□□□□ -1.15
PDS5AQ29RF7 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
PDS5AQ29RF7 SNORD35A-201ENST00000363389 86 ntBASIC7.85□□□□□ -1.15
PDS5AQ29RF7 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
PDS5AQ29RF7 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.85□□□□□ -1.15
PDS5AQ29RF7 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
PDS5AQ29RF7 MIR640-201ENST00000385086 96 ntBASIC7.85□□□□□ -1.15
PDS5AQ29RF7 VN1R12P-201ENST00000403778 876 ntBASIC7.85□□□□□ -1.15
PDS5AQ29RF7 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.85□□□□□ -1.15
PDS5AQ29RF7 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.85□□□□□ -1.15
PDS5AQ29RF7 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
PDS5AQ29RF7 AC005017.1-201ENST00000482002 490 ntBASIC7.85□□□□□ -1.15
PDS5AQ29RF7 SUMO2P7-201ENST00000511179 285 ntBASIC7.85□□□□□ -1.15
PDS5AQ29RF7 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms