Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC244452.1-201ENST00000413798 141 ntBASIC7.59□□□□□ -1.19
CCNA1P78396 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.59□□□□□ -1.19
CCNA1P78396 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.59□□□□□ -1.19
CCNA1P78396 CRYGGP-201ENST00000443337 145 ntBASIC7.59□□□□□ -1.19
CCNA1P78396 RARRES2P3-201ENST00000457739 473 ntBASIC7.59□□□□□ -1.19
CCNA1P78396 RN7SL221P-201ENST00000466190 281 ntBASIC7.59□□□□□ -1.19
CCNA1P78396 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CCNA1P78396 RPL19P11-201ENST00000495944 589 ntBASIC7.59□□□□□ -1.19
CCNA1P78396 H3F3AP3-201ENST00000497682 407 ntBASIC7.59□□□□□ -1.19
CCNA1P78396 AP004609.2-201ENST00000532177 190 ntBASIC7.59□□□□□ -1.19
CCNA1P78396 AC023968.1-201ENST00000560719 475 ntBASIC7.59□□□□□ -1.19
CCNA1P78396 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
CCNA1P78396 AL365223.1-201ENST00000574864 1297 ntBASIC7.59□□□□□ -1.19
CCNA1P78396 RN7SL366P-201ENST00000577957 292 ntBASIC7.59□□□□□ -1.19
CCNA1P78396 GTF2IP6-201ENST00000583143 541 ntBASIC7.59□□□□□ -1.19
CCNA1P78396 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.59□□□□□ -1.19
CCNA1P78396 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.59□□□□□ -1.19
CCNA1P78396 AC010463.3-201ENST00000594077 500 ntBASIC7.59□□□□□ -1.19
CCNA1P78396 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC7.59□□□□□ -1.19
CCNA1P78396 AC124916.2-201ENST00000604416 224 ntBASIC7.59□□□□□ -1.19
CCNA1P78396 AC091768.1-201ENST00000609258 930 ntBASIC7.59□□□□□ -1.19
CCNA1P78396 AC027348.2-201ENST00000624375 642 ntBASIC7.59□□□□□ -1.19
CCNA1P78396 AL357140.4-201ENST00000636827 412 ntBASIC7.59□□□□□ -1.19
CCNA1P78396 AC183089.2-201ENST00000637931 916 ntBASIC7.59□□□□□ -1.19
CCNA1P78396 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CCNA1P78396 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CCNA1P78396 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCNA1P78396 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCNA1P78396 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCNA1P78396 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.59□□□□□ -1.19
CCNA1P78396 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CCNA1P78396 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCNA1P78396 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.59□□□□□ -1.19
CCNA1P78396 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CCNA1P78396 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CCNA1P78396 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.59□□□□□ -1.19
CCNA1P78396 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCNA1P78396 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
CCNA1P78396 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CCNA1P78396 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.58□□□□□ -1.2
CCNA1P78396 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.58□□□□□ -1.2
CCNA1P78396 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.58□□□□□ -1.2
CCNA1P78396 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
CCNA1P78396 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
CCNA1P78396 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.58□□□□□ -1.2
CCNA1P78396 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.58□□□□□ -1.2
CCNA1P78396 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CCNA1P78396 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CCNA1P78396 AC110716.2-201ENST00000563865 3945 ntBASIC7.58□□□□□ -1.2
CCNA1P78396 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
CCNA1P78396 AC104966.1-201ENST00000467010 1464 ntBASIC7.58□□□□□ -1.2
CCNA1P78396 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CCNA1P78396 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CCNA1P78396 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CCNA1P78396 GCNT1P4-201ENST00000404096 329 ntBASIC7.58□□□□□ -1.2
CCNA1P78396 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.58□□□□□ -1.2
CCNA1P78396 RPL7AP14-201ENST00000424041 802 ntBASIC7.58□□□□□ -1.2
CCNA1P78396 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.58□□□□□ -1.2
CCNA1P78396 AC092865.3-201ENST00000425390 1026 ntBASIC7.58□□□□□ -1.2
CCNA1P78396 AC083862.1-201ENST00000427378 1242 ntBASIC7.58□□□□□ -1.2
CCNA1P78396 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.58□□□□□ -1.2
CCNA1P78396 SCARNA5-201ENST00000516201 276 ntBASIC7.58□□□□□ -1.2
CCNA1P78396 AC008429.2-201ENST00000523057 864 ntBASIC7.58□□□□□ -1.2
CCNA1P78396 TRIM51DP-201ENST00000529746 596 ntBASIC7.58□□□□□ -1.2
CCNA1P78396 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.58□□□□□ -1.2
CCNA1P78396 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC7.58□□□□□ -1.2
CCNA1P78396 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC7.58□□□□□ -1.2
CCNA1P78396 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CCNA1P78396 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CCNA1P78396 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CCNA1P78396 AC004232.2-201ENST00000574245 821 ntBASIC7.58□□□□□ -1.2
CCNA1P78396 RN7SL208P-201ENST00000577964 296 ntBASIC7.58□□□□□ -1.2
CCNA1P78396 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.58□□□□□ -1.2
CCNA1P78396 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.58□□□□□ -1.2
CCNA1P78396 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.58□□□□□ -1.2
CCNA1P78396 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CCNA1P78396 AC010168.2-201ENST00000562691 5428 ntBASIC7.58□□□□□ -1.2
CCNA1P78396 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
CCNA1P78396 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
CCNA1P78396 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.58□□□□□ -1.2
CCNA1P78396 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CCNA1P78396 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CCNA1P78396 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CCNA1P78396 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CCNA1P78396 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.58□□□□□ -1.2
CCNA1P78396 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCNA1P78396 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.57□□□□□ -1.2
CCNA1P78396 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCNA1P78396 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.57□□□□□ -1.2
CCNA1P78396 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.57□□□□□ -1.2
CCNA1P78396 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.57□□□□□ -1.2
CCNA1P78396 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCNA1P78396 AC011592.1-201ENST00000624647 3634 ntBASIC7.57□□□□□ -1.2
CCNA1P78396 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.57□□□□□ -1.2
CCNA1P78396 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCNA1P78396 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCNA1P78396 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CCNA1P78396 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
CCNA1P78396 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCNA1P78396 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms