Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CDH6P55285 AP002004.1-206ENST00000532441 876 ntBASIC6.85□□□□□ -1.31
CDH6P55285 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.85□□□□□ -1.31
CDH6P55285 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CDH6P55285 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.85□□□□□ -1.31
CDH6P55285 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.85□□□□□ -1.31
CDH6P55285 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.85□□□□□ -1.31
CDH6P55285 MIR3159-201ENST00000584572 74 ntBASIC6.85□□□□□ -1.31
CDH6P55285 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.85□□□□□ -1.31
CDH6P55285 RPS4XP21-201ENST00000603814 750 ntBASIC6.85□□□□□ -1.31
CDH6P55285 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.85□□□□□ -1.31
CDH6P55285 AC139792.1-201ENST00000607051 647 ntBASIC6.85□□□□□ -1.31
CDH6P55285 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.85□□□□□ -1.31
CDH6P55285 PCA3_2.1-201ENST00000612507 409 ntBASIC6.85□□□□□ -1.31
CDH6P55285 MIR6883-201ENST00000614952 78 ntBASIC6.85□□□□□ -1.31
CDH6P55285 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.85□□□□□ -1.31
CDH6P55285 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.85□□□□□ -1.31
CDH6P55285 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.85□□□□□ -1.31
CDH6P55285 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.85□□□□□ -1.31
CDH6P55285 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDH6P55285 AP000641.1-201ENST00000531988 1639 ntBASIC6.85□□□□□ -1.31
CDH6P55285 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.85□□□□□ -1.31
CDH6P55285 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.85□□□□□ -1.31
CDH6P55285 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CDH6P55285 AC023245.2-201ENST00000530760 2978 ntBASIC6.85□□□□□ -1.31
CDH6P55285 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
CDH6P55285 AL669831.5-218ENST00000591702 1873 ntBASIC6.85□□□□□ -1.31
CDH6P55285 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.85□□□□□ -1.31
CDH6P55285 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CDH6P55285 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.85□□□□□ -1.31
CDH6P55285 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CDH6P55285 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CDH6P55285 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.84□□□□□ -1.31
CDH6P55285 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CDH6P55285 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CDH6P55285 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.84□□□□□ -1.31
CDH6P55285 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CDH6P55285 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDH6P55285 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDH6P55285 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.84□□□□□ -1.31
CDH6P55285 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDH6P55285 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
CDH6P55285 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.84□□□□□ -1.31
CDH6P55285 PSMC1P4-201ENST00000515236 1327 ntBASIC6.84□□□□□ -1.31
CDH6P55285 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.84□□□□□ -1.31
CDH6P55285 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
CDH6P55285 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CDH6P55285 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CDH6P55285 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.84□□□□□ -1.31
CDH6P55285 AL451136.1-201ENST00000435399 325 ntBASIC6.84□□□□□ -1.31
CDH6P55285 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.84□□□□□ -1.31
CDH6P55285 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.84□□□□□ -1.31
CDH6P55285 TVP23CP1-201ENST00000450317 639 ntBASIC6.84□□□□□ -1.31
CDH6P55285 RPL23AP64-201ENST00000469465 435 ntBASIC6.84□□□□□ -1.31
CDH6P55285 AC099340.1-201ENST00000475247 599 ntBASIC6.84□□□□□ -1.31
CDH6P55285 AC022415.1-202ENST00000486612 523 ntBASIC6.84□□□□□ -1.31
CDH6P55285 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.84□□□□□ -1.31
CDH6P55285 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.84□□□□□ -1.31
CDH6P55285 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.84□□□□□ -1.31
CDH6P55285 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.84□□□□□ -1.31
CDH6P55285 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.84□□□□□ -1.31
CDH6P55285 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.84□□□□□ -1.31
CDH6P55285 AL162632.2-201ENST00000553933 399 ntBASIC6.84□□□□□ -1.31
CDH6P55285 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.84□□□□□ -1.31
CDH6P55285 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.84□□□□□ -1.31
CDH6P55285 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.84□□□□□ -1.31
CDH6P55285 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.84□□□□□ -1.31
CDH6P55285 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.84□□□□□ -1.31
CDH6P55285 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.84□□□□□ -1.31
CDH6P55285 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.84□□□□□ -1.31
CDH6P55285 MIR6070-201ENST00000613967 103 ntBASIC6.84□□□□□ -1.31
CDH6P55285 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.84□□□□□ -1.31
CDH6P55285 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.31
CDH6P55285 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.84□□□□□ -1.31
CDH6P55285 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDH6P55285 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.84□□□□□ -1.31
CDH6P55285 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.84□□□□□ -1.31
CDH6P55285 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
CDH6P55285 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
CDH6P55285 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.84□□□□□ -1.31
CDH6P55285 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.84□□□□□ -1.31
CDH6P55285 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.84□□□□□ -1.31
CDH6P55285 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CDH6P55285 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CDH6P55285 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
CDH6P55285 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CDH6P55285 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CDH6P55285 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.84□□□□□ -1.32
CDH6P55285 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CDH6P55285 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CDH6P55285 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CDH6P55285 AC010401.2-201ENST00000575137 4934 ntBASIC6.83□□□□□ -1.32
CDH6P55285 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
CDH6P55285 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.83□□□□□ -1.32
CDH6P55285 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.83□□□□□ -1.32
CDH6P55285 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CDH6P55285 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.83□□□□□ -1.32
CDH6P55285 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CDH6P55285 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CDH6P55285 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms