Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
HTTP42858 CADM2-201ENST00000383699 9488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
HTTP42858 AL355375.1-201ENST00000405686 392 ntBASIC6.86□□□□□ -1.31
HTTP42858 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.86□□□□□ -1.31
HTTP42858 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.86□□□□□ -1.31
HTTP42858 CEACAMP10-202ENST00000495431 496 ntBASIC6.86□□□□□ -1.31
HTTP42858 OR51K1P-201ENST00000510214 950 ntBASIC6.86□□□□□ -1.31
HTTP42858 AC106800.3-201ENST00000511389 308 ntBASIC6.86□□□□□ -1.31
HTTP42858 IGHV3-57-201ENST00000520143 280 ntBASIC6.86□□□□□ -1.31
HTTP42858 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.86□□□□□ -1.31
HTTP42858 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
HTTP42858 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
HTTP42858 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HTTP42858 SRRM1P3-201ENST00000426911 2678 ntBASIC6.86□□□□□ -1.31
HTTP42858 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HTTP42858 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HTTP42858 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HTTP42858 RYR1-202ENST00000359596 15117 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
HTTP42858 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.86□□□□□ -1.31
HTTP42858 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.85□□□□□ -1.31
HTTP42858 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.85□□□□□ -1.31
HTTP42858 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HTTP42858 RPS26P13-201ENST00000419030 330 ntBASIC6.85□□□□□ -1.31
HTTP42858 RANP1-206ENST00000455094 651 ntBASIC6.85□□□□□ -1.31
HTTP42858 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.85□□□□□ -1.31
HTTP42858 RN7SL346P-201ENST00000491561 294 ntBASIC6.85□□□□□ -1.31
HTTP42858 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.85□□□□□ -1.31
HTTP42858 AL049539.1-201ENST00000611964 459 ntBASIC6.85□□□□□ -1.31
HTTP42858 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
HTTP42858 POLR1B-217ENST00000541869 5059 ntTSL 2 BASIC6.85□□□□□ -1.31
HTTP42858 PHACTR4-202ENST00000373839 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
HTTP42858 EPHA5-206ENST00000622150 8421 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
HTTP42858 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.85□□□□□ -1.31
HTTP42858 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.85□□□□□ -1.31
HTTP42858 AL136531.3-201ENST00000624378 3658 ntBASIC6.85□□□□□ -1.31
HTTP42858 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.85□□□□□ -1.31
HTTP42858 DROSHA-202ENST00000442743 4991 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
HTTP42858 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
HTTP42858 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HTTP42858 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC6.85□□□□□ -1.31
HTTP42858 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
HTTP42858 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HTTP42858 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.85□□□□□ -1.31
HTTP42858 AL096829.1-201ENST00000413677 457 ntBASIC6.85□□□□□ -1.31
HTTP42858 RPL26P29-201ENST00000415623 438 ntBASIC6.85□□□□□ -1.31
HTTP42858 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.85□□□□□ -1.31
HTTP42858 RPSAP50-201ENST00000481955 852 ntBASIC6.85□□□□□ -1.31
HTTP42858 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HTTP42858 AC074050.1-201ENST00000563247 211 ntBASIC6.85□□□□□ -1.31
HTTP42858 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.85□□□□□ -1.31
HTTP42858 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.85□□□□□ -1.31
HTTP42858 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.85□□□□□ -1.31
HTTP42858 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.85□□□□□ -1.31
HTTP42858 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.85□□□□□ -1.31
HTTP42858 DEPDC5-205ENST00000400248 5307 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HTTP42858 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HTTP42858 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.85□□□□□ -1.31
HTTP42858 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC6.85□□□□□ -1.31
HTTP42858 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.85□□□□□ -1.31
HTTP42858 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HTTP42858 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HTTP42858 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HTTP42858 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.85□□□□□ -1.31
HTTP42858 SORD-201ENST00000267814 4909 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HTTP42858 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HTTP42858 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC6.85□□□□□ -1.31
HTTP42858 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HTTP42858 NBPF15-203ENST00000577412 4707 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
HTTP42858 AC092724.1-201ENST00000624623 3397 ntBASIC6.85□□□□□ -1.31
HTTP42858 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.85□□□□□ -1.31
HTTP42858 ANKRD54P1-201ENST00000433115 471 ntBASIC6.85□□□□□ -1.31
HTTP42858 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.85□□□□□ -1.31
HTTP42858 NENFP3-201ENST00000503735 313 ntBASIC6.85□□□□□ -1.31
HTTP42858 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
HTTP42858 AC137768.1-201ENST00000549998 553 ntBASIC6.85□□□□□ -1.31
HTTP42858 MIR4697-201ENST00000582977 78 ntBASIC6.85□□□□□ -1.31
HTTP42858 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
HTTP42858 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HTTP42858 MAPK10-377ENST00000642006 2752 ntBASIC6.85□□□□□ -1.31
HTTP42858 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HTTP42858 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
HTTP42858 FBXL21-201ENST00000297158 1305 ntBASIC6.84□□□□□ -1.31
HTTP42858 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC6.84□□□□□ -1.31
HTTP42858 INTS3-201ENST00000318967 5235 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HTTP42858 SCN5A-205ENST00000423572 8362 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HTTP42858 MIR765-201ENST00000390226 114 ntBASIC6.84□□□□□ -1.31
HTTP42858 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HTTP42858 SUMO2P7-201ENST00000511179 285 ntBASIC6.84□□□□□ -1.31
HTTP42858 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.84□□□□□ -1.31
HTTP42858 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.84□□□□□ -1.31
HTTP42858 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.84□□□□□ -1.31
HTTP42858 MIR7159-201ENST00000620587 66 ntBASIC6.84□□□□□ -1.31
HTTP42858 AL137067.2-201ENST00000621202 131 ntBASIC6.84□□□□□ -1.31
HTTP42858 AC136428.4-201ENST00000634254 1155 ntBASIC6.84□□□□□ -1.31
HTTP42858 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.84□□□□□ -1.31
HTTP42858 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
HTTP42858 PSEN1-205ENST00000406768 4062 ntTSL 2 BASIC6.84□□□□□ -1.31
HTTP42858 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HTTP42858 AGPAT4-201ENST00000320285 7865 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HTTP42858 ZNF469-202ENST00000565624 13279 ntAPPRIS ALT2 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms