Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CNGA1P29973 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.95□□□□□ -1.14
CNGA1P29973 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CNGA1P29973 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CNGA1P29973 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CNGA1P29973 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.95□□□□□ -1.14
CNGA1P29973 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CNGA1P29973 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.95□□□□□ -1.14
CNGA1P29973 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CNGA1P29973 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CNGA1P29973 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CNGA1P29973 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CNGA1P29973 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CNGA1P29973 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CNGA1P29973 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CNGA1P29973 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CNGA1P29973 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
CNGA1P29973 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CNGA1P29973 RNU6-618P-201ENST00000363518 112 ntBASIC7.95□□□□□ -1.14
CNGA1P29973 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.95□□□□□ -1.14
CNGA1P29973 AL139158.1-201ENST00000424719 340 ntBASIC7.95□□□□□ -1.14
CNGA1P29973 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.95□□□□□ -1.14
CNGA1P29973 RPL17P35-201ENST00000432217 549 ntBASIC7.95□□□□□ -1.14
CNGA1P29973 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.95□□□□□ -1.14
CNGA1P29973 AC114755.4-201ENST00000439114 443 ntBASIC7.95□□□□□ -1.14
CNGA1P29973 MORF4L1P4-201ENST00000450245 976 ntBASIC7.95□□□□□ -1.14
CNGA1P29973 RPL23AP8-201ENST00000479812 475 ntBASIC7.95□□□□□ -1.14
CNGA1P29973 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC7.95□□□□□ -1.14
CNGA1P29973 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.95□□□□□ -1.14
CNGA1P29973 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC7.95□□□□□ -1.14
CNGA1P29973 GUSBP9-201ENST00000510138 584 ntBASIC7.95□□□□□ -1.14
CNGA1P29973 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC7.95□□□□□ -1.14
CNGA1P29973 AC093816.1-201ENST00000515076 913 ntBASIC7.95□□□□□ -1.14
CNGA1P29973 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC7.95□□□□□ -1.14
CNGA1P29973 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC7.95□□□□□ -1.14
CNGA1P29973 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC7.95□□□□□ -1.14
CNGA1P29973 KCTD9P6-201ENST00000522306 950 ntBASIC7.95□□□□□ -1.14
CNGA1P29973 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC7.95□□□□□ -1.14
CNGA1P29973 AC019227.1-201ENST00000526902 510 ntBASIC7.95□□□□□ -1.14
CNGA1P29973 SAA3P-201ENST00000533267 365 ntBASIC7.95□□□□□ -1.14
CNGA1P29973 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.95□□□□□ -1.14
CNGA1P29973 MTND2P17-201ENST00000550281 688 ntBASIC7.95□□□□□ -1.14
CNGA1P29973 AL136520.1-202ENST00000555494 763 ntBASIC7.95□□□□□ -1.14
CNGA1P29973 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CNGA1P29973 AC010547.7-201ENST00000570323 333 ntBASIC7.95□□□□□ -1.14
CNGA1P29973 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC7.95□□□□□ -1.14
CNGA1P29973 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.95□□□□□ -1.14
CNGA1P29973 uc_338.29-201ENST00000615099 168 ntBASIC7.95□□□□□ -1.14
CNGA1P29973 MIR6861-201ENST00000618657 64 ntBASIC7.95□□□□□ -1.14
CNGA1P29973 AL450226.2-201ENST00000622913 439 ntBASIC7.95□□□□□ -1.14
CNGA1P29973 AL049541.2-201ENST00000626377 555 ntBASIC7.95□□□□□ -1.14
CNGA1P29973 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.95□□□□□ -1.14
CNGA1P29973 AL929601.4-201ENST00000613011 1341 ntBASIC7.95□□□□□ -1.14
CNGA1P29973 CDY19P-201ENST00000411668 1613 ntBASIC7.95□□□□□ -1.14
CNGA1P29973 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.95□□□□□ -1.14
CNGA1P29973 CDY18P-201ENST00000438294 1609 ntBASIC7.95□□□□□ -1.14
CNGA1P29973 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.95□□□□□ -1.14
CNGA1P29973 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CNGA1P29973 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CNGA1P29973 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
CNGA1P29973 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.95□□□□□ -1.14
CNGA1P29973 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CNGA1P29973 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.95□□□□□ -1.14
CNGA1P29973 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.95□□□□□ -1.14
CNGA1P29973 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CNGA1P29973 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CNGA1P29973 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.95□□□□□ -1.14
CNGA1P29973 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.95□□□□□ -1.14
CNGA1P29973 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CNGA1P29973 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CNGA1P29973 AC107980.1-201ENST00000558671 3355 ntBASIC7.94□□□□□ -1.14
CNGA1P29973 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
CNGA1P29973 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CNGA1P29973 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CNGA1P29973 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
CNGA1P29973 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
CNGA1P29973 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CNGA1P29973 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CNGA1P29973 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CNGA1P29973 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
CNGA1P29973 UGT2B25P-201ENST00000511504 1586 ntBASIC7.94□□□□□ -1.14
CNGA1P29973 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CNGA1P29973 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.94□□□□□ -1.14
CNGA1P29973 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CNGA1P29973 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CNGA1P29973 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CNGA1P29973 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CNGA1P29973 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CNGA1P29973 AC010894.1-201ENST00000313760 361 ntBASIC7.94□□□□□ -1.14
CNGA1P29973 RGS5-202ENST00000367903 934 ntTSL 3 BASIC7.94□□□□□ -1.14
CNGA1P29973 FAM204BP-201ENST00000369171 701 ntBASIC7.94□□□□□ -1.14
CNGA1P29973 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CNGA1P29973 AL359715.1-201ENST00000404330 555 ntBASIC7.94□□□□□ -1.14
CNGA1P29973 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC7.94□□□□□ -1.14
CNGA1P29973 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.94□□□□□ -1.14
CNGA1P29973 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.94□□□□□ -1.14
CNGA1P29973 AC096644.3-201ENST00000416788 338 ntBASIC7.94□□□□□ -1.14
CNGA1P29973 AC104698.1-201ENST00000435671 276 ntBASIC7.94□□□□□ -1.14
CNGA1P29973 AC128677.1-201ENST00000436016 442 ntBASIC7.94□□□□□ -1.14
CNGA1P29973 AL590762.3-201ENST00000436372 640 ntBASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms