Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 AC022106.1-201ENST00000612834 766 ntBASIC8□□□□□ -1.13
COL5A3P25940 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
COL5A3P25940 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC8□□□□□ -1.13
COL5A3P25940 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC8□□□□□ -1.13
COL5A3P25940 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
COL5A3P25940 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
COL5A3P25940 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC8□□□□□ -1.13
COL5A3P25940 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
COL5A3P25940 MTAP-201ENST00000380172 6122 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
COL5A3P25940 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
COL5A3P25940 AF287957.1-201ENST00000607368 1595 ntBASIC8□□□□□ -1.13
COL5A3P25940 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC8□□□□□ -1.13
COL5A3P25940 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
COL5A3P25940 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC8□□□□□ -1.13
COL5A3P25940 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
COL5A3P25940 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC8□□□□□ -1.13
COL5A3P25940 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC8□□□□□ -1.13
COL5A3P25940 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
COL5A3P25940 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC8□□□□□ -1.13
COL5A3P25940 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC8□□□□□ -1.13
COL5A3P25940 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
COL5A3P25940 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC8□□□□□ -1.13
COL5A3P25940 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC8□□□□□ -1.13
COL5A3P25940 RANP2-201ENST00000456833 229 ntBASIC8□□□□□ -1.13
COL5A3P25940 AC008638.1-201ENST00000506035 866 ntBASIC8□□□□□ -1.13
COL5A3P25940 AP000648.1-201ENST00000529682 397 ntBASIC8□□□□□ -1.13
COL5A3P25940 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC8□□□□□ -1.13
COL5A3P25940 AC009120.3-201ENST00000563335 499 ntBASIC8□□□□□ -1.13
COL5A3P25940 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC8□□□□□ -1.13
COL5A3P25940 AC027229.1-201ENST00000583887 253 ntBASIC8□□□□□ -1.13
COL5A3P25940 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
COL5A3P25940 PLEKHA3P1-201ENST00000598554 894 ntBASIC8□□□□□ -1.13
COL5A3P25940 AC013244.1-201ENST00000604279 193 ntBASIC8□□□□□ -1.13
COL5A3P25940 AL031601.1-201ENST00000605702 394 ntBASIC8□□□□□ -1.13
COL5A3P25940 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC8□□□□□ -1.13
COL5A3P25940 CGA-206ENST00000630630 832 ntTSL 2 BASIC8□□□□□ -1.13
COL5A3P25940 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
COL5A3P25940 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC8□□□□□ -1.13
COL5A3P25940 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
COL5A3P25940 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
COL5A3P25940 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
COL5A3P25940 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.99□□□□□ -1.13
COL5A3P25940 AC119674.1-204ENST00000641348 1343 ntBASIC7.99□□□□□ -1.13
COL5A3P25940 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.99□□□□□ -1.13
COL5A3P25940 AC022325.1-201ENST00000502748 2199 ntBASIC7.99□□□□□ -1.13
COL5A3P25940 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
COL5A3P25940 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.99□□□□□ -1.13
COL5A3P25940 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
COL5A3P25940 UNC79-205ENST00000555664 8484 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
COL5A3P25940 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
COL5A3P25940 DPYSL2-201ENST00000311151 4603 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
COL5A3P25940 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
COL5A3P25940 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
COL5A3P25940 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC7.99□□□□□ -1.13
COL5A3P25940 AC022206.1-201ENST00000495947 347 ntBASIC7.99□□□□□ -1.13
COL5A3P25940 AC090958.1-201ENST00000511122 351 ntBASIC7.99□□□□□ -1.13
COL5A3P25940 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.99□□□□□ -1.13
COL5A3P25940 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC7.99□□□□□ -1.13
COL5A3P25940 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.99□□□□□ -1.13
COL5A3P25940 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
COL5A3P25940 AC005393.1-201ENST00000617916 584 ntBASIC7.99□□□□□ -1.13
COL5A3P25940 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
COL5A3P25940 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
COL5A3P25940 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
COL5A3P25940 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
COL5A3P25940 ZNF493-201ENST00000339914 1665 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
COL5A3P25940 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC7.99□□□□□ -1.13
COL5A3P25940 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
COL5A3P25940 AC024651.2-201ENST00000562480 2098 ntBASIC7.99□□□□□ -1.13
COL5A3P25940 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.99□□□□□ -1.13
COL5A3P25940 RNF19BPY-201ENST00000458209 1550 ntBASIC7.99□□□□□ -1.13
COL5A3P25940 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
COL5A3P25940 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
COL5A3P25940 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
COL5A3P25940 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
COL5A3P25940 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
COL5A3P25940 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
COL5A3P25940 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
COL5A3P25940 AC010624.4-201ENST00000597606 1351 ntBASIC7.98□□□□□ -1.13
COL5A3P25940 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC7.98□□□□□ -1.13
COL5A3P25940 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.98□□□□□ -1.13
COL5A3P25940 AL353662.1-201ENST00000439099 327 ntBASIC7.98□□□□□ -1.13
COL5A3P25940 AL512593.1-201ENST00000444758 779 ntBASIC7.98□□□□□ -1.13
COL5A3P25940 AP006222.1-205ENST00000450734 457 ntBASIC7.98□□□□□ -1.13
COL5A3P25940 RPSAP39-201ENST00000467439 883 ntBASIC7.98□□□□□ -1.13
COL5A3P25940 MTND6P16-201ENST00000504006 520 ntBASIC7.98□□□□□ -1.13
COL5A3P25940 AC021269.1-201ENST00000526860 705 ntBASIC7.98□□□□□ -1.13
COL5A3P25940 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.98□□□□□ -1.13
COL5A3P25940 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.98□□□□□ -1.13
COL5A3P25940 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.98□□□□□ -1.13
COL5A3P25940 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.98□□□□□ -1.13
COL5A3P25940 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.98□□□□□ -1.13
COL5A3P25940 AL359704.2-201ENST00000604335 521 ntBASIC7.98□□□□□ -1.13
COL5A3P25940 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.98□□□□□ -1.13
COL5A3P25940 AC004477.3-201ENST00000614061 590 ntBASIC7.98□□□□□ -1.13
COL5A3P25940 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.98□□□□□ -1.13
COL5A3P25940 RARSP1-201ENST00000542842 1418 ntBASIC7.98□□□□□ -1.13
COL5A3P25940 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.98□□□□□ -1.13
COL5A3P25940 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
COL5A3P25940 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms