Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 USP48-203ENST00000374732 3037 ntTSL 2 BASIC6.76□□□□□ -1.33
HMGA1P17096 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC6.76□□□□□ -1.33
HMGA1P17096 AC007679.3-201ENST00000434035 414 ntBASIC6.76□□□□□ -1.33
HMGA1P17096 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.76□□□□□ -1.33
HMGA1P17096 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.76□□□□□ -1.33
HMGA1P17096 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.76□□□□□ -1.33
HMGA1P17096 MAST4-IT1-201ENST00000514241 658 ntBASIC6.76□□□□□ -1.33
HMGA1P17096 RNA5SP206-201ENST00000516703 121 ntBASIC6.76□□□□□ -1.33
HMGA1P17096 AC036111.2-201ENST00000533247 901 ntBASIC6.76□□□□□ -1.33
HMGA1P17096 TOMM20P1-201ENST00000534518 427 ntBASIC6.76□□□□□ -1.33
HMGA1P17096 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.76□□□□□ -1.33
HMGA1P17096 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.76□□□□□ -1.33
HMGA1P17096 MIR4502-201ENST00000580432 81 ntBASIC6.76□□□□□ -1.33
HMGA1P17096 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HMGA1P17096 MIR6071-201ENST00000616741 78 ntBASIC6.76□□□□□ -1.33
HMGA1P17096 AL162377.2-201ENST00000624532 337 ntBASIC6.76□□□□□ -1.33
HMGA1P17096 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC6.76□□□□□ -1.33
HMGA1P17096 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
HMGA1P17096 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HMGA1P17096 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HMGA1P17096 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.76□□□□□ -1.33
HMGA1P17096 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HMGA1P17096 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HMGA1P17096 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HMGA1P17096 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HMGA1P17096 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC6.76□□□□□ -1.33
HMGA1P17096 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HMGA1P17096 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HMGA1P17096 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.76□□□□□ -1.33
HMGA1P17096 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HMGA1P17096 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGA1P17096 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGA1P17096 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGA1P17096 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.75□□□□□ -1.33
HMGA1P17096 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGA1P17096 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
HMGA1P17096 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGA1P17096 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGA1P17096 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.75□□□□□ -1.33
HMGA1P17096 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC6.75□□□□□ -1.33
HMGA1P17096 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGA1P17096 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HMGA1P17096 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.75□□□□□ -1.33
HMGA1P17096 RNU1-46P-201ENST00000384425 164 ntBASIC6.75□□□□□ -1.33
HMGA1P17096 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGA1P17096 OR7E156P-201ENST00000400303 464 ntBASIC6.75□□□□□ -1.33
HMGA1P17096 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
HMGA1P17096 AL139805.1-201ENST00000407837 289 ntBASIC6.75□□□□□ -1.33
HMGA1P17096 RNA5SP115-201ENST00000411160 107 ntBASIC6.75□□□□□ -1.33
HMGA1P17096 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.75□□□□□ -1.33
HMGA1P17096 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.75□□□□□ -1.33
HMGA1P17096 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HMGA1P17096 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.75□□□□□ -1.33
HMGA1P17096 AC092865.3-201ENST00000425390 1026 ntBASIC6.75□□□□□ -1.33
HMGA1P17096 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.75□□□□□ -1.33
HMGA1P17096 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.75□□□□□ -1.33
HMGA1P17096 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.75□□□□□ -1.33
HMGA1P17096 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.75□□□□□ -1.33
HMGA1P17096 AC094019.1-201ENST00000434678 472 ntBASIC6.75□□□□□ -1.33
HMGA1P17096 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.75□□□□□ -1.33
HMGA1P17096 CEACAMP5-201ENST00000448037 961 ntBASIC6.75□□□□□ -1.33
HMGA1P17096 GAPDHP16-201ENST00000448152 962 ntBASIC6.75□□□□□ -1.33
HMGA1P17096 AL139156.3-201ENST00000454802 394 ntBASIC6.75□□□□□ -1.33
HMGA1P17096 RN7SL705P-201ENST00000481678 294 ntBASIC6.75□□□□□ -1.33
HMGA1P17096 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.75□□□□□ -1.33
HMGA1P17096 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.75□□□□□ -1.33
HMGA1P17096 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.75□□□□□ -1.33
HMGA1P17096 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.75□□□□□ -1.33
HMGA1P17096 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.75□□□□□ -1.33
HMGA1P17096 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.75□□□□□ -1.33
HMGA1P17096 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.75□□□□□ -1.33
HMGA1P17096 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.75□□□□□ -1.33
HMGA1P17096 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HMGA1P17096 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGA1P17096 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGA1P17096 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.75□□□□□ -1.33
HMGA1P17096 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
HMGA1P17096 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.75□□□□□ -1.33
HMGA1P17096 CYP39A1-205ENST00000619708 2269 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HMGA1P17096 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGA1P17096 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGA1P17096 AC110597.1-201ENST00000562669 3176 ntBASIC6.75□□□□□ -1.33
HMGA1P17096 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HMGA1P17096 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC6.75□□□□□ -1.33
HMGA1P17096 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HMGA1P17096 NEK2P2-201ENST00000438441 1338 ntBASIC6.75□□□□□ -1.33
HMGA1P17096 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HMGA1P17096 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.74□□□□□ -1.33
HMGA1P17096 UG0898H09-202ENST00000623646 7040 ntBASIC6.74□□□□□ -1.33
HMGA1P17096 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.74□□□□□ -1.33
HMGA1P17096 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HMGA1P17096 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HMGA1P17096 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HMGA1P17096 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.74□□□□□ -1.33
HMGA1P17096 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HMGA1P17096 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
HMGA1P17096 GCNT1P4-201ENST00000404096 329 ntBASIC6.74□□□□□ -1.33
HMGA1P17096 RN7SKP108-201ENST00000411367 328 ntBASIC6.74□□□□□ -1.33
HMGA1P17096 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.74□□□□□ -1.33
HMGA1P17096 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms