Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PSMC1P6-201ENST00000477233 1319 ntBASIC6.05□□□□□ -1.44
ZIC3O60481 AC119674.1-204ENST00000641348 1343 ntBASIC6.05□□□□□ -1.44
ZIC3O60481 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
ZIC3O60481 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ZIC3O60481 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.05□□□□□ -1.44
ZIC3O60481 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ZIC3O60481 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ZIC3O60481 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
ZIC3O60481 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.05□□□□□ -1.44
ZIC3O60481 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ZIC3O60481 SNORD94-201ENST00000386037 137 ntBASIC6.05□□□□□ -1.44
ZIC3O60481 MIR541-201ENST00000401360 84 ntBASIC6.05□□□□□ -1.44
ZIC3O60481 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.05□□□□□ -1.44
ZIC3O60481 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC6.05□□□□□ -1.44
ZIC3O60481 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.05□□□□□ -1.44
ZIC3O60481 MTATP6P11-201ENST00000428071 670 ntBASIC6.05□□□□□ -1.44
ZIC3O60481 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.05□□□□□ -1.44
ZIC3O60481 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC6.05□□□□□ -1.44
ZIC3O60481 TRIM60P13-201ENST00000432350 1283 ntBASIC6.05□□□□□ -1.44
ZIC3O60481 RAD1P2-201ENST00000446414 663 ntBASIC6.05□□□□□ -1.44
ZIC3O60481 AL513343.1-201ENST00000451818 792 ntBASIC6.05□□□□□ -1.44
ZIC3O60481 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC6.05□□□□□ -1.44
ZIC3O60481 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ZIC3O60481 RN7SL561P-201ENST00000488553 281 ntBASIC6.05□□□□□ -1.44
ZIC3O60481 SNRPCP11-201ENST00000492453 205 ntBASIC6.05□□□□□ -1.44
ZIC3O60481 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
ZIC3O60481 NACAP5-201ENST00000509863 636 ntBASIC6.05□□□□□ -1.44
ZIC3O60481 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.05□□□□□ -1.44
ZIC3O60481 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.05□□□□□ -1.44
ZIC3O60481 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC6.05□□□□□ -1.44
ZIC3O60481 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.05□□□□□ -1.44
ZIC3O60481 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.05□□□□□ -1.44
ZIC3O60481 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.05□□□□□ -1.44
ZIC3O60481 AC005519.1-201ENST00000554490 601 ntBASIC6.05□□□□□ -1.44
ZIC3O60481 AC135626.1-201ENST00000556983 435 ntBASIC6.05□□□□□ -1.44
ZIC3O60481 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ZIC3O60481 AC106785.4-201ENST00000569492 412 ntBASIC6.05□□□□□ -1.44
ZIC3O60481 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.05□□□□□ -1.44
ZIC3O60481 AC005479.3-201ENST00000602790 431 ntBASIC6.05□□□□□ -1.44
ZIC3O60481 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.05□□□□□ -1.44
ZIC3O60481 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.05□□□□□ -1.44
ZIC3O60481 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.05□□□□□ -1.44
ZIC3O60481 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.05□□□□□ -1.44
ZIC3O60481 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
ZIC3O60481 MIR6813-201ENST00000621638 56 ntBASIC6.05□□□□□ -1.44
ZIC3O60481 RAB28P4-201ENST00000622233 665 ntBASIC6.05□□□□□ -1.44
ZIC3O60481 CLUHP10-201ENST00000631979 980 ntBASIC6.05□□□□□ -1.44
ZIC3O60481 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.05□□□□□ -1.44
ZIC3O60481 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
ZIC3O60481 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.05□□□□□ -1.44
ZIC3O60481 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.05□□□□□ -1.44
ZIC3O60481 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ZIC3O60481 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.05□□□□□ -1.44
ZIC3O60481 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.05□□□□□ -1.44
ZIC3O60481 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ZIC3O60481 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.05□□□□□ -1.44
ZIC3O60481 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ZIC3O60481 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ZIC3O60481 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.04□□□□□ -1.44
ZIC3O60481 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.04□□□□□ -1.44
ZIC3O60481 AC007998.4-201ENST00000612496 2533 ntBASIC6.04□□□□□ -1.44
ZIC3O60481 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ZIC3O60481 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ZIC3O60481 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ZIC3O60481 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
ZIC3O60481 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
ZIC3O60481 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.04□□□□□ -1.44
ZIC3O60481 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ZIC3O60481 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ZIC3O60481 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ZIC3O60481 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ZIC3O60481 AL449283.1-201ENST00000602631 3403 ntBASIC6.04□□□□□ -1.44
ZIC3O60481 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.04□□□□□ -1.44
ZIC3O60481 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ZIC3O60481 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.04□□□□□ -1.44
ZIC3O60481 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ZIC3O60481 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ZIC3O60481 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ZIC3O60481 PPIAP24-201ENST00000328558 471 ntBASIC6.04□□□□□ -1.44
ZIC3O60481 AL034417.1-201ENST00000399343 800 ntBASIC6.04□□□□□ -1.44
ZIC3O60481 DHFRP5-201ENST00000406944 564 ntBASIC6.04□□□□□ -1.44
ZIC3O60481 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.04□□□□□ -1.44
ZIC3O60481 RN7SKP296-201ENST00000411185 341 ntBASIC6.04□□□□□ -1.44
ZIC3O60481 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.04□□□□□ -1.44
ZIC3O60481 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ZIC3O60481 AL356121.1-201ENST00000442911 156 ntBASIC6.04□□□□□ -1.44
ZIC3O60481 GAPDHP16-201ENST00000448152 962 ntBASIC6.04□□□□□ -1.44
ZIC3O60481 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC6.04□□□□□ -1.44
ZIC3O60481 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.04□□□□□ -1.44
ZIC3O60481 AL445991.1-201ENST00000450381 475 ntBASIC6.04□□□□□ -1.44
ZIC3O60481 AC117395.1-201ENST00000487390 403 ntBASIC6.04□□□□□ -1.44
ZIC3O60481 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ZIC3O60481 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.04□□□□□ -1.44
ZIC3O60481 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
ZIC3O60481 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.04□□□□□ -1.44
ZIC3O60481 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.04□□□□□ -1.44
ZIC3O60481 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
ZIC3O60481 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.04□□□□□ -1.44
ZIC3O60481 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.04□□□□□ -1.44
ZIC3O60481 RN7SL66P-201ENST00000582099 264 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms