Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 MIR6823-201ENST00000622118 61 ntBASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 AC006328.2-201ENST00000623198 397 ntBASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 AC012005.2-201ENST00000624333 397 ntBASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NPIPA3F8WFD2 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NPIPA3F8WFD2 MRPS17P1-201ENST00000596009 3130 ntBASIC6.15□□□□□ -1.43
NPIPA3F8WFD2 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.15□□□□□ -1.43
NPIPA3F8WFD2 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
NPIPA3F8WFD2 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NPIPA3F8WFD2 MAPK10-379ENST00000642013 1385 ntBASIC6.15□□□□□ -1.43
NPIPA3F8WFD2 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NPIPA3F8WFD2 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
NPIPA3F8WFD2 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NPIPA3F8WFD2 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
NPIPA3F8WFD2 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.15□□□□□ -1.43
NPIPA3F8WFD2 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
NPIPA3F8WFD2 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 AL451064.2-201ENST00000623514 1654 ntBASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 RPL12P13-201ENST00000310055 497 ntBASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 AC107977.1-201ENST00000355745 939 ntBASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 RNA5SP65-201ENST00000363166 119 ntBASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 RN7SKP271-201ENST00000410528 320 ntBASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 RPL7AP51-201ENST00000422016 760 ntBASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 GAPDHP57-201ENST00000424400 585 ntBASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 GAPDHP34-201ENST00000432112 823 ntBASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 OR6C71P-201ENST00000432580 913 ntBASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 SNRPBP1-201ENST00000443634 282 ntBASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 GAPDHP20-201ENST00000444107 1007 ntBASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 AL359839.1-201ENST00000451975 1160 ntBASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 MEF2AP1-201ENST00000454867 863 ntBASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 AKR1D1P1-201ENST00000457236 936 ntBASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 AC019084.1-201ENST00000457337 432 ntBASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 RPS7P10-201ENST00000464254 603 ntBASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 AC021220.1-201ENST00000507445 630 ntBASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 MIR3157-201ENST00000578688 85 ntBASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 AC012175.1-201ENST00000603755 531 ntBASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 AL590032.1-201ENST00000604920 252 ntBASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 AC087821.1-201ENST00000623639 567 ntBASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 AC217777.1-201ENST00000570034 1471 ntBASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPIPA3F8WFD2 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
NPIPA3F8WFD2 ZNF806-201ENST00000438300 1774 ntBASIC6.13□□□□□ -1.43
NPIPA3F8WFD2 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms