Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 AL731556.1-201ENST00000394628 3711 ntBASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 Z97989.1-201ENST00000531702 2421 ntBASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 AC010401.2-201ENST00000575137 4934 ntBASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 AP002370.1-201ENST00000528055 1602 ntBASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 RNA5SP176-201ENST00000390956 110 ntBASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 RPLP1P10-201ENST00000413972 339 ntBASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 AC091492.1-201ENST00000419844 272 ntBASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 PAICSP2-201ENST00000429118 1150 ntBASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 AL592114.2-201ENST00000440142 532 ntBASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 AL158214.1-201ENST00000444423 404 ntBASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 CREM-242ENST00000490511 469 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 RPL10P7-201ENST00000495649 625 ntBASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 SNX18P23-201ENST00000510867 677 ntBASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 AC114940.1-201ENST00000512162 1265 ntBASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 AC026774.2-201ENST00000513990 1098 ntBASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 FCGR1CP-201ENST00000579737 1127 ntBASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 RN7SL657P-201ENST00000582431 293 ntBASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 RPS27AP19-201ENST00000597285 458 ntBASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 SNX18P10-201ENST00000625014 519 ntBASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 AC006453.3-201ENST00000635891 377 ntBASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 TTC41P-205ENST00000551270 3963 ntBASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 AC093278.2-201ENST00000564956 2485 ntBASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DRB4X5D2U9 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 TATDN2P3-201ENST00000452855 3665 ntBASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 STAG3L4-201ENST00000352103 530 ntBASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 RN7SKP189-201ENST00000365042 330 ntBASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms