Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 NOVA1-201ENST00000344429 896 ntTSL 2 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 UBE2D3-206ENST00000357194 660 ntTSL 2 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 GSTZ1-203ENST00000361389 1010 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 RNA5SP238-201ENST00000365464 120 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 LCN1P1-201ENST00000372031 505 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 MIR106B-201ENST00000385301 82 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 U3.43-201ENST00000410734 213 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 POU6F2-AS2-201ENST00000420243 514 ntTSL 5 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 TBC1D3P7-201ENST00000428328 914 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 RPL5P27-201ENST00000437011 881 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AC105942.1-202ENST00000438509 952 ntTSL 3 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AC253536.4-201ENST00000440539 267 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 GRM8-206ENST00000444921 1251 ntTSL 3 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AC092967.1-201ENST00000449016 481 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AC005517.1-201ENST00000452091 489 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AC012493.1-201ENST00000453252 760 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AL592043.2-201ENST00000454146 743 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 GAPDHP28-201ENST00000455134 1003 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 UCK2-205ENST00000469256 753 ntTSL 3 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 RN7SL159P-201ENST00000485164 292 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 CREM-238ENST00000488741 651 ntTSL 2 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 RN7SL28P-201ENST00000488836 298 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 MTCO1P55-201ENST00000489829 745 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AL135933.1-201ENST00000498657 802 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 TMEM161B-AS1-207ENST00000506584 717 ntTSL 3 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AC226119.2-201ENST00000513501 530 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 IGKV1D-22-201ENST00000518953 324 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 HDAC2-AS2-211ENST00000520034 790 ntTSL 3 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AP005435.2-201ENST00000525489 590 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AP001000.1-201ENST00000526843 742 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 KCTD21-AS1-205ENST00000530261 910 ntTSL 4 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AC022882.1-201ENST00000532142 501 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 CD59-214ENST00000534312 572 ntAPPRIS ALT2 TSL 3 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 LINC02454-202ENST00000541391 612 ntTSL 3 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AC244502.2-201ENST00000543361 851 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AC084879.1-203ENST00000550470 1257 ntTSL 5 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 BMS1P16-201ENST00000556075 1147 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 GSTZ1-216ENST00000556627 919 ntTSL 3 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AL139317.2-201ENST00000556998 158 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 RN7SL493P-201ENST00000580401 299 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AP005328.1-202ENST00000580781 776 ntTSL 3 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 RN7SL667P-201ENST00000582817 298 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 RN7SL198P-201ENST00000583190 258 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AC011921.2-201ENST00000589465 152 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 PRR13P5-201ENST00000596581 442 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AC068620.2-201ENST00000602927 529 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AC007255.2-201ENST00000604053 631 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 CUX2P1-201ENST00000606426 298 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 CGA-202ENST00000610310 615 ntTSL 3 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 MIR6745-201ENST00000612694 127 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 CEACAM5-209ENST00000616453 1160 ntTSL 5 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 RFPL3-AS1_1.2-201ENST00000618747 88 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 DDX41-218ENST00000625286 150 ntTSL 5 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 PSME2-218ENST00000630027 185 ntTSL 3 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AC003992.1-201ENST00000635364 557 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AC106774.10-201ENST00000638486 599 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 UGP2-232ENST00000640075 567 ntTSL 5 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AC241585.4-201ENST00000640951 686 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 CLVS2-202ENST00000368438 1359 ntTSL 5 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC3.21□□□□□ -1.89
LINC01558Q9Y6Z2 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
LINC01558Q9Y6Z2 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC3.21□□□□□ -1.89
LINC01558Q9Y6Z2 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 RSRC1-202ENST00000312179 1443 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LINC01558Q9Y6Z2 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 219.5 ms