Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RNA5SP518-201ENST00000515957 119 ntBASIC5.81□□□□□ -1.48
SSX3Q99909 RPL10P18-201ENST00000519384 309 ntBASIC5.81□□□□□ -1.48
SSX3Q99909 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.81□□□□□ -1.48
SSX3Q99909 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC5.81□□□□□ -1.48
SSX3Q99909 AP001646.2-201ENST00000528645 1156 ntBASIC5.81□□□□□ -1.48
SSX3Q99909 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.81□□□□□ -1.48
SSX3Q99909 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SSX3Q99909 AC090971.3-201ENST00000557871 1041 ntBASIC5.81□□□□□ -1.48
SSX3Q99909 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SSX3Q99909 NQO1-205ENST00000561500 891 ntTSL 3 BASIC5.81□□□□□ -1.48
SSX3Q99909 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC5.81□□□□□ -1.48
SSX3Q99909 MIR744-201ENST00000578242 98 ntBASIC5.81□□□□□ -1.48
SSX3Q99909 AC015801.1-201ENST00000585651 153 ntBASIC5.81□□□□□ -1.48
SSX3Q99909 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.81□□□□□ -1.48
SSX3Q99909 AC068802.1-201ENST00000603420 732 ntBASIC5.81□□□□□ -1.48
SSX3Q99909 RPL12P48-201ENST00000605620 304 ntBASIC5.81□□□□□ -1.48
SSX3Q99909 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC5.81□□□□□ -1.48
SSX3Q99909 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.81□□□□□ -1.48
SSX3Q99909 AC073862.4-201ENST00000622982 854 ntBASIC5.81□□□□□ -1.48
SSX3Q99909 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC5.81□□□□□ -1.48
SSX3Q99909 AC117503.3-201ENST00000623811 601 ntBASIC5.81□□□□□ -1.48
SSX3Q99909 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC5.81□□□□□ -1.48
SSX3Q99909 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.81□□□□□ -1.48
SSX3Q99909 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC5.81□□□□□ -1.48
SSX3Q99909 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX3Q99909 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX3Q99909 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
SSX3Q99909 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SSX3Q99909 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.81□□□□□ -1.48
SSX3Q99909 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
SSX3Q99909 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.81□□□□□ -1.48
SSX3Q99909 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
SSX3Q99909 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX3Q99909 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX3Q99909 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SSX3Q99909 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SSX3Q99909 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
SSX3Q99909 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SSX3Q99909 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.8□□□□□ -1.48
SSX3Q99909 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SSX3Q99909 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.8□□□□□ -1.48
SSX3Q99909 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSX3Q99909 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SSX3Q99909 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC5.8□□□□□ -1.48
SSX3Q99909 AL592429.1-201ENST00000403909 1473 ntBASIC5.8□□□□□ -1.48
SSX3Q99909 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSX3Q99909 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SSX3Q99909 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SSX3Q99909 U3.48-201ENST00000363172 216 ntBASIC5.8□□□□□ -1.48
SSX3Q99909 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.8□□□□□ -1.48
SSX3Q99909 ZNF37CP-201ENST00000406795 241 ntBASIC5.8□□□□□ -1.48
SSX3Q99909 OR52N3P-201ENST00000413417 934 ntBASIC5.8□□□□□ -1.48
SSX3Q99909 AL157698.1-201ENST00000415190 1011 ntBASIC5.8□□□□□ -1.48
SSX3Q99909 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.8□□□□□ -1.48
SSX3Q99909 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SSX3Q99909 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC5.8□□□□□ -1.48
SSX3Q99909 RPS10P14-201ENST00000440748 502 ntBASIC5.8□□□□□ -1.48
SSX3Q99909 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC5.8□□□□□ -1.48
SSX3Q99909 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.8□□□□□ -1.48
SSX3Q99909 TVP23CP1-201ENST00000450317 639 ntBASIC5.8□□□□□ -1.48
SSX3Q99909 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC5.8□□□□□ -1.48
SSX3Q99909 TRBV8-1-201ENST00000481590 279 ntBASIC5.8□□□□□ -1.48
SSX3Q99909 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC5.8□□□□□ -1.48
SSX3Q99909 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC5.8□□□□□ -1.48
SSX3Q99909 CFI-204ENST00000510800 667 ntTSL 2 BASIC5.8□□□□□ -1.48
SSX3Q99909 AC017007.1-201ENST00000511960 415 ntBASIC5.8□□□□□ -1.48
SSX3Q99909 AC114940.1-201ENST00000512162 1265 ntBASIC5.8□□□□□ -1.48
SSX3Q99909 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSX3Q99909 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC5.8□□□□□ -1.48
SSX3Q99909 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.8□□□□□ -1.48
SSX3Q99909 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC5.8□□□□□ -1.48
SSX3Q99909 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SSX3Q99909 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC5.8□□□□□ -1.48
SSX3Q99909 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC5.8□□□□□ -1.48
SSX3Q99909 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.8□□□□□ -1.48
SSX3Q99909 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC5.8□□□□□ -1.48
SSX3Q99909 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC5.8□□□□□ -1.48
SSX3Q99909 HNRNPA1P71-201ENST00000559135 950 ntBASIC5.8□□□□□ -1.48
SSX3Q99909 AL031846.1-201ENST00000560933 314 ntBASIC5.8□□□□□ -1.48
SSX3Q99909 AC234775.3-201ENST00000564612 656 ntBASIC5.8□□□□□ -1.48
SSX3Q99909 RN7SL131P-201ENST00000579043 256 ntBASIC5.8□□□□□ -1.48
SSX3Q99909 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.8□□□□□ -1.48
SSX3Q99909 PTCHD3P1-201ENST00000612350 537 ntBASIC5.8□□□□□ -1.48
SSX3Q99909 AC016542.3-201ENST00000623520 619 ntBASIC5.8□□□□□ -1.48
SSX3Q99909 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC5.8□□□□□ -1.48
SSX3Q99909 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC5.8□□□□□ -1.48
SSX3Q99909 AP001153.1-201ENST00000641024 338 ntBASIC5.8□□□□□ -1.48
SSX3Q99909 MAPK10-350ENST00000641777 965 ntBASIC5.8□□□□□ -1.48
SSX3Q99909 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSX3Q99909 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSX3Q99909 AL442128.2-201ENST00000620246 1824 ntBASIC5.8□□□□□ -1.48
SSX3Q99909 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC5.8□□□□□ -1.48
SSX3Q99909 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.8□□□□□ -1.48
SSX3Q99909 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSX3Q99909 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.8□□□□□ -1.48
SSX3Q99909 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.8□□□□□ -1.48
SSX3Q99909 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC5.8□□□□□ -1.48
SSX3Q99909 AC027575.3-201ENST00000583058 2747 ntBASIC5.8□□□□□ -1.48
SSX3Q99909 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC5.8□□□□□ -1.48
SSX3Q99909 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms