Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RPL12P9-201ENST00000412942 488 ntBASIC9.12□□□□□ -0.95
LRCH3Q96II8 AC004987.3-201ENST00000413879 771 ntBASIC9.12□□□□□ -0.95
LRCH3Q96II8 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 ATP5F1P1-201ENST00000433775 569 ntBASIC9.12□□□□□ -0.95
LRCH3Q96II8 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 SNX18P4-201ENST00000456554 838 ntBASIC9.12□□□□□ -0.95
LRCH3Q96II8 AC004890.1-201ENST00000461005 181 ntBASIC9.12□□□□□ -0.95
LRCH3Q96II8 AC025062.1-201ENST00000465163 644 ntBASIC9.12□□□□□ -0.95
LRCH3Q96II8 RN7SL145P-201ENST00000469955 296 ntBASIC9.12□□□□□ -0.95
LRCH3Q96II8 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 NPM1P5-201ENST00000557228 838 ntBASIC9.12□□□□□ -0.95
LRCH3Q96II8 AL132855.1-201ENST00000557368 207 ntTSL 3 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 DNM1P34-202ENST00000567850 315 ntBASIC9.12□□□□□ -0.95
LRCH3Q96II8 MIR5008-201ENST00000584300 94 ntBASIC9.12□□□□□ -0.95
LRCH3Q96II8 OR7A18P-201ENST00000600416 277 ntBASIC9.12□□□□□ -0.95
LRCH3Q96II8 AC106028.5-201ENST00000610332 395 ntBASIC9.12□□□□□ -0.95
LRCH3Q96II8 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 AC100757.2-201ENST00000622316 280 ntBASIC9.12□□□□□ -0.95
LRCH3Q96II8 AC087893.2-201ENST00000623272 255 ntBASIC9.12□□□□□ -0.95
LRCH3Q96II8 LINC01002-216ENST00000632351 572 ntTSL 5 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 RPL36AP21-202ENST00000639134 430 ntBASIC9.12□□□□□ -0.95
LRCH3Q96II8 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 AC099063.3-201ENST00000642066 185 ntBASIC9.12□□□□□ -0.95
LRCH3Q96II8 GIGYF2-203ENST00000409451 5937 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LRCH3Q96II8 GJB2-201ENST00000382844 2309 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 CNIH4-202ENST00000366857 3963 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LRCH3Q96II8 NTNG2-201ENST00000372179 3984 ntTSL 5 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 SLC7A6-201ENST00000219343 6251 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LRCH3Q96II8 HIPK2-201ENST00000342645 2937 ntTSL 5 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 RAB3GAP1-203ENST00000442034 4185 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LRCH3Q96II8 HAPLN1-201ENST00000274341 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LRCH3Q96II8 MAMLD1-204ENST00000426613 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
LRCH3Q96II8 GOSR2-240ENST00000640621 3059 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LRCH3Q96II8 PSG8-204ENST00000406636 1610 ntTSL 2 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LRCH3Q96II8 AL512310.11-201ENST00000611741 1837 ntTSL 5 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 ZBTB43-201ENST00000373457 5695 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LRCH3Q96II8 DDX43P1-201ENST00000510713 1763 ntBASIC9.12□□□□□ -0.95
LRCH3Q96II8 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LRCH3Q96II8 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC9.12□□□□□ -0.95
LRCH3Q96II8 TOP1-201ENST00000361337 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LRCH3Q96II8 C2-201ENST00000299367 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LRCH3Q96II8 LINC00705-201ENST00000417883 1745 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
LRCH3Q96II8 AL356019.2-201ENST00000556738 3829 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 AL157713.1-201ENST00000379752 1531 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 MTCO1P23-201ENST00000415223 1526 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 NPIPA7-202ENST00000530217 1331 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 RAE1-202ENST00000395840 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LRCH3Q96II8 CARD8-216ENST00000520153 2617 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
LRCH3Q96II8 AC116456.2-201ENST00000623018 2209 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 B4GALT6-202ENST00000306851 3891 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LRCH3Q96II8 CNOT6LP1-201ENST00000559681 1462 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 LINC02334-201ENST00000617568 4959 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
LRCH3Q96II8 DMBT1-202ENST00000338354 7686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
LRCH3Q96II8 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
LRCH3Q96II8 DMBT1-204ENST00000368909 7686 ntAPPRIS P4 TSL 5 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 DMBT1-207ENST00000619379 7686 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
LRCH3Q96II8 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LRCH3Q96II8 OR10D1P-201ENST00000355343 936 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 RNA5SP218-201ENST00000363188 109 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 RNU6-534P-201ENST00000364877 106 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LRCH3Q96II8 NUP35P1-201ENST00000422734 947 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 CYP2C56P-201ENST00000440076 291 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 OR7E125P-201ENST00000443450 846 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 RPL21P33-201ENST00000444831 484 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 CYCSP42-201ENST00000450823 238 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 AC093166.4-201ENST00000457867 318 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 AC109454.1-201ENST00000471205 498 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 OR52A4P-201ENST00000472867 958 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 RN7SL89P-201ENST00000480252 283 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 FLJ46284-203ENST00000521230 407 ntTSL 3 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 AP002004.1-206ENST00000532441 876 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 AL162311.2-201ENST00000550416 709 ntBASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms