Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RN7SL230P-201ENST00000580835 303 ntBASIC7.29□□□□□ -1.24
VCPP55072 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC7.29□□□□□ -1.24
VCPP55072 AC111186.1-201ENST00000604684 130 ntBASIC7.29□□□□□ -1.24
VCPP55072 AC063962.1-201ENST00000608199 521 ntBASIC7.29□□□□□ -1.24
VCPP55072 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.29□□□□□ -1.24
VCPP55072 AC025262.3-201ENST00000623666 360 ntBASIC7.29□□□□□ -1.24
VCPP55072 AC027559.1-201ENST00000636288 271 ntBASIC7.29□□□□□ -1.24
VCPP55072 BRD7P6-201ENST00000431406 1860 ntBASIC7.29□□□□□ -1.24
VCPP55072 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
VCPP55072 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VCPP55072 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.29□□□□□ -1.24
VCPP55072 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
VCPP55072 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.29□□□□□ -1.24
VCPP55072 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.29□□□□□ -1.24
VCPP55072 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.29□□□□□ -1.24
VCPP55072 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.29□□□□□ -1.24
VCPP55072 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
VCPP55072 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
VCPP55072 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
VCPP55072 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
VCPP55072 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VCPP55072 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.29□□□□□ -1.24
VCPP55072 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VCPP55072 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.28□□□□□ -1.24
VCPP55072 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.28□□□□□ -1.24
VCPP55072 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.28□□□□□ -1.24
VCPP55072 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
VCPP55072 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
VCPP55072 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
VCPP55072 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
VCPP55072 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
VCPP55072 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VCPP55072 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VCPP55072 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
VCPP55072 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.28□□□□□ -1.24
VCPP55072 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
VCPP55072 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VCPP55072 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.28□□□□□ -1.24
VCPP55072 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
VCPP55072 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
VCPP55072 RPL9P21-201ENST00000392269 505 ntBASIC7.28□□□□□ -1.24
VCPP55072 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.28□□□□□ -1.24
VCPP55072 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.28□□□□□ -1.24
VCPP55072 RPL6P21-201ENST00000418672 846 ntBASIC7.28□□□□□ -1.24
VCPP55072 RPS29P14-201ENST00000431518 171 ntBASIC7.28□□□□□ -1.24
VCPP55072 CLUHP1-201ENST00000435012 1190 ntBASIC7.28□□□□□ -1.24
VCPP55072 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.28□□□□□ -1.24
VCPP55072 POU5F1P5-201ENST00000445059 658 ntBASIC7.28□□□□□ -1.24
VCPP55072 SDHCP3-201ENST00000445371 506 ntBASIC7.28□□□□□ -1.24
VCPP55072 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC7.28□□□□□ -1.24
VCPP55072 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC7.28□□□□□ -1.24
VCPP55072 AC096743.1-201ENST00000485172 319 ntBASIC7.28□□□□□ -1.24
VCPP55072 RN7SKP11-201ENST00000517018 287 ntBASIC7.28□□□□□ -1.24
VCPP55072 AC009879.1-201ENST00000520029 839 ntBASIC7.28□□□□□ -1.24
VCPP55072 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.28□□□□□ -1.24
VCPP55072 AC096708.2-201ENST00000577676 512 ntBASIC7.28□□□□□ -1.24
VCPP55072 EIF4A3P1-201ENST00000578499 647 ntBASIC7.28□□□□□ -1.24
VCPP55072 AC011891.2-201ENST00000604949 397 ntBASIC7.28□□□□□ -1.24
VCPP55072 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
VCPP55072 AC018659.2-201ENST00000624690 715 ntBASIC7.28□□□□□ -1.24
VCPP55072 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.28□□□□□ -1.24
VCPP55072 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
VCPP55072 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
VCPP55072 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC7.28□□□□□ -1.24
VCPP55072 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
VCPP55072 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
VCPP55072 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.28□□□□□ -1.24
VCPP55072 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.28□□□□□ -1.24
VCPP55072 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VCPP55072 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VCPP55072 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
VCPP55072 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VCPP55072 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VCPP55072 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC7.27□□□□□ -1.24
VCPP55072 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.24
VCPP55072 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
VCPP55072 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.27□□□□□ -1.24
VCPP55072 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
VCPP55072 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VCPP55072 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
VCPP55072 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VCPP55072 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.27□□□□□ -1.25
VCPP55072 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
VCPP55072 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
VCPP55072 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VCPP55072 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
VCPP55072 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.27□□□□□ -1.25
VCPP55072 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.27□□□□□ -1.25
VCPP55072 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC7.27□□□□□ -1.25
VCPP55072 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.27□□□□□ -1.25
VCPP55072 CDK7P1-201ENST00000434574 693 ntBASIC7.27□□□□□ -1.25
VCPP55072 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC7.27□□□□□ -1.25
VCPP55072 AL121578.2-201ENST00000448797 447 ntBASIC7.27□□□□□ -1.25
VCPP55072 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC7.27□□□□□ -1.25
VCPP55072 AC112484.3-201ENST00000505910 329 ntBASIC7.27□□□□□ -1.25
VCPP55072 EEF1B2P2-201ENST00000519625 676 ntBASIC7.27□□□□□ -1.25
VCPP55072 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.27□□□□□ -1.25
VCPP55072 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.27□□□□□ -1.25
VCPP55072 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.27□□□□□ -1.25
VCPP55072 OR9L1P-201ENST00000529493 933 ntBASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms