Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
BRCA2P51587 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.85□□□□□ -1.31
BRCA2P51587 TMEM167A-201ENST00000502346 4630 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
BRCA2P51587 LRRC27-204ENST00000368614 6374 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
BRCA2P51587 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
BRCA2P51587 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
BRCA2P51587 FTLP8-201ENST00000446770 267 ntBASIC6.85□□□□□ -1.31
BRCA2P51587 OR7E116P-201ENST00000448529 957 ntBASIC6.85□□□□□ -1.31
BRCA2P51587 RPS21P4-201ENST00000487122 248 ntBASIC6.85□□□□□ -1.31
BRCA2P51587 AC093890.1-201ENST00000502554 540 ntBASIC6.85□□□□□ -1.31
BRCA2P51587 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.85□□□□□ -1.31
BRCA2P51587 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.85□□□□□ -1.31
BRCA2P51587 OR4A13P-201ENST00000529316 942 ntBASIC6.85□□□□□ -1.31
BRCA2P51587 AC137768.1-201ENST00000549998 553 ntBASIC6.85□□□□□ -1.31
BRCA2P51587 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.85□□□□□ -1.31
BRCA2P51587 AC073488.2-201ENST00000631903 751 ntBASIC6.85□□□□□ -1.31
BRCA2P51587 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.85□□□□□ -1.31
BRCA2P51587 OR2T1-202ENST00000642005 2104 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
BRCA2P51587 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
BRCA2P51587 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC6.85□□□□□ -1.31
BRCA2P51587 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
BRCA2P51587 SNX29-205ENST00000566228 8171 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
BRCA2P51587 GSN-AS1-201ENST00000414544 4763 ntBASIC6.85□□□□□ -1.31
BRCA2P51587 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
BRCA2P51587 RN7SKP279-201ENST00000411383 298 ntBASIC6.85□□□□□ -1.31
BRCA2P51587 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.85□□□□□ -1.31
BRCA2P51587 RN7SL72P-201ENST00000460697 269 ntBASIC6.85□□□□□ -1.31
BRCA2P51587 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.85□□□□□ -1.31
BRCA2P51587 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.85□□□□□ -1.31
BRCA2P51587 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.85□□□□□ -1.31
BRCA2P51587 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.85□□□□□ -1.31
BRCA2P51587 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
BRCA2P51587 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
BRCA2P51587 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
BRCA2P51587 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
BRCA2P51587 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
BRCA2P51587 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
BRCA2P51587 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
BRCA2P51587 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.85□□□□□ -1.31
BRCA2P51587 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
BRCA2P51587 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
BRCA2P51587 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
BRCA2P51587 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.85□□□□□ -1.31
BRCA2P51587 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.85□□□□□ -1.31
BRCA2P51587 AC027088.4-201ENST00000611559 1947 ntBASIC6.85□□□□□ -1.31
BRCA2P51587 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
BRCA2P51587 MARK2P4-201ENST00000503381 2380 ntBASIC6.85□□□□□ -1.31
BRCA2P51587 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC6.85□□□□□ -1.31
BRCA2P51587 RN7SKP77-201ENST00000363261 353 ntBASIC6.85□□□□□ -1.31
BRCA2P51587 RPS27P18-201ENST00000431701 247 ntBASIC6.85□□□□□ -1.31
BRCA2P51587 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.85□□□□□ -1.31
BRCA2P51587 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
BRCA2P51587 AC092865.4-201ENST00000477936 615 ntBASIC6.85□□□□□ -1.31
BRCA2P51587 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.85□□□□□ -1.31
BRCA2P51587 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
BRCA2P51587 AL121612.2-201ENST00000612261 482 ntBASIC6.85□□□□□ -1.31
BRCA2P51587 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
BRCA2P51587 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC6.85□□□□□ -1.31
BRCA2P51587 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
BRCA2P51587 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
BRCA2P51587 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC6.85□□□□□ -1.31
BRCA2P51587 FBXL21-201ENST00000297158 1305 ntBASIC6.85□□□□□ -1.31
BRCA2P51587 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
BRCA2P51587 AL592429.1-201ENST00000403909 1473 ntBASIC6.84□□□□□ -1.31
BRCA2P51587 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
BRCA2P51587 MAPK10-383ENST00000642032 3390 ntBASIC6.84□□□□□ -1.31
BRCA2P51587 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
BRCA2P51587 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
BRCA2P51587 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.84□□□□□ -1.31
BRCA2P51587 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
BRCA2P51587 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
BRCA2P51587 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.84□□□□□ -1.31
BRCA2P51587 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
BRCA2P51587 HIGD1AP14-201ENST00000507617 282 ntBASIC6.84□□□□□ -1.31
BRCA2P51587 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.84□□□□□ -1.31
BRCA2P51587 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
BRCA2P51587 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.84□□□□□ -1.31
BRCA2P51587 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
BRCA2P51587 BTBD3-215ENST00000618918 4486 ntAPPRIS ALT1 TSL 4 BASIC6.84□□□□□ -1.31
BRCA2P51587 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC6.84□□□□□ -1.31
BRCA2P51587 MFSD8-219ENST00000641228 2559 ntBASIC6.84□□□□□ -1.31
BRCA2P51587 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.84□□□□□ -1.31
BRCA2P51587 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
BRCA2P51587 ATM-215ENST00000530958 5718 ntTSL 2 BASIC6.84□□□□□ -1.31
BRCA2P51587 IKZF4-202ENST00000431367 5021 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
BRCA2P51587 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
BRCA2P51587 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.84□□□□□ -1.31
BRCA2P51587 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.84□□□□□ -1.31
BRCA2P51587 MIR4436B2-201ENST00000581415 91 ntBASIC6.84□□□□□ -1.31
BRCA2P51587 MIR4436B1-201ENST00000583272 91 ntBASIC6.84□□□□□ -1.31
BRCA2P51587 MYH13-202ENST00000418404 6067 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
BRCA2P51587 AP001541.1-201ENST00000623322 1904 ntBASIC6.84□□□□□ -1.31
BRCA2P51587 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
BRCA2P51587 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC6.84□□□□□ -1.32
BRCA2P51587 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.32
BRCA2P51587 CSNK1A1-201ENST00000261798 6067 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.32
BRCA2P51587 CASP8AP2-205ENST00000551025 6151 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
BRCA2P51587 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
BRCA2P51587 RNA5SP65-201ENST00000363166 119 ntBASIC6.83□□□□□ -1.32
BRCA2P51587 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms