Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
POLR2AP24928 TMEM167A-201ENST00000502346 4630 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
POLR2AP24928 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
POLR2AP24928 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
POLR2AP24928 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
POLR2AP24928 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
POLR2AP24928 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
POLR2AP24928 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
POLR2AP24928 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC7.62□□□□□ -1.19
POLR2AP24928 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC7.62□□□□□ -1.19
POLR2AP24928 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC7.62□□□□□ -1.19
POLR2AP24928 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
POLR2AP24928 EMC3-AS1-205ENST00000438698 534 ntBASIC7.62□□□□□ -1.19
POLR2AP24928 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.62□□□□□ -1.19
POLR2AP24928 AC026348.1-201ENST00000462549 1053 ntBASIC7.62□□□□□ -1.19
POLR2AP24928 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.62□□□□□ -1.19
POLR2AP24928 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.62□□□□□ -1.19
POLR2AP24928 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.62□□□□□ -1.19
POLR2AP24928 IGKV2-19-201ENST00000518132 283 ntBASIC7.62□□□□□ -1.19
POLR2AP24928 MEG8-217ENST00000556637 924 ntTSL 5 BASIC7.62□□□□□ -1.19
POLR2AP24928 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.62□□□□□ -1.19
POLR2AP24928 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
POLR2AP24928 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.62□□□□□ -1.19
POLR2AP24928 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
POLR2AP24928 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
POLR2AP24928 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
POLR2AP24928 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC7.62□□□□□ -1.19
POLR2AP24928 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
POLR2AP24928 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC7.62□□□□□ -1.19
POLR2AP24928 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
POLR2AP24928 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
POLR2AP24928 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
POLR2AP24928 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC7.62□□□□□ -1.19
POLR2AP24928 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.62□□□□□ -1.19
POLR2AP24928 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
POLR2AP24928 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
POLR2AP24928 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
POLR2AP24928 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
POLR2AP24928 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
POLR2AP24928 TMSB4XP2-201ENST00000335179 210 ntBASIC7.62□□□□□ -1.19
POLR2AP24928 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
POLR2AP24928 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
POLR2AP24928 PRELID1P2-201ENST00000407805 396 ntBASIC7.62□□□□□ -1.19
POLR2AP24928 RN7SKP271-201ENST00000410528 320 ntBASIC7.62□□□□□ -1.19
POLR2AP24928 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC7.62□□□□□ -1.19
POLR2AP24928 AC006455.6-201ENST00000426192 893 ntBASIC7.62□□□□□ -1.19
POLR2AP24928 AC092473.1-201ENST00000441098 221 ntBASIC7.62□□□□□ -1.19
POLR2AP24928 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.62□□□□□ -1.19
POLR2AP24928 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC7.62□□□□□ -1.19
POLR2AP24928 AC002456.2-201ENST00000509356 380 ntBASIC7.62□□□□□ -1.19
POLR2AP24928 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.62□□□□□ -1.19
POLR2AP24928 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.62□□□□□ -1.19
POLR2AP24928 RNA5SP434-201ENST00000516647 121 ntBASIC7.62□□□□□ -1.19
POLR2AP24928 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.62□□□□□ -1.19
POLR2AP24928 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC7.62□□□□□ -1.19
POLR2AP24928 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
POLR2AP24928 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.62□□□□□ -1.19
POLR2AP24928 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.62□□□□□ -1.19
POLR2AP24928 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.62□□□□□ -1.19
POLR2AP24928 AC005332.4-201ENST00000592752 579 ntBASIC7.62□□□□□ -1.19
POLR2AP24928 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.62□□□□□ -1.19
POLR2AP24928 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.62□□□□□ -1.19
POLR2AP24928 AC073488.2-201ENST00000631903 751 ntBASIC7.62□□□□□ -1.19
POLR2AP24928 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.62□□□□□ -1.19
POLR2AP24928 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
POLR2AP24928 SEMA3E-202ENST00000427262 2414 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
POLR2AP24928 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
POLR2AP24928 MAGEB16-205ENST00000399992 1734 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
POLR2AP24928 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
POLR2AP24928 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
POLR2AP24928 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
POLR2AP24928 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC7.61□□□□□ -1.19
POLR2AP24928 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
POLR2AP24928 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
POLR2AP24928 SNORA58B-201ENST00000364259 136 ntBASIC7.61□□□□□ -1.19
POLR2AP24928 MIR105-2-201ENST00000385083 81 ntBASIC7.61□□□□□ -1.19
POLR2AP24928 MIR1203-201ENST00000408812 85 ntBASIC7.61□□□□□ -1.19
POLR2AP24928 RPL7L1P11-201ENST00000446092 721 ntBASIC7.61□□□□□ -1.19
POLR2AP24928 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.61□□□□□ -1.19
POLR2AP24928 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
POLR2AP24928 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC7.61□□□□□ -1.19
POLR2AP24928 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.61□□□□□ -1.19
POLR2AP24928 RNU6-751P-201ENST00000516382 101 ntBASIC7.61□□□□□ -1.19
POLR2AP24928 RNA5SP271-201ENST00000516700 88 ntBASIC7.61□□□□□ -1.19
POLR2AP24928 AC022826.1-201ENST00000519383 805 ntBASIC7.61□□□□□ -1.19
POLR2AP24928 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.61□□□□□ -1.19
POLR2AP24928 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.61□□□□□ -1.19
POLR2AP24928 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.61□□□□□ -1.19
POLR2AP24928 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.61□□□□□ -1.19
POLR2AP24928 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC7.61□□□□□ -1.19
POLR2AP24928 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC7.61□□□□□ -1.19
POLR2AP24928 AL118556.2-201ENST00000614375 824 ntBASIC7.61□□□□□ -1.19
POLR2AP24928 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.61□□□□□ -1.19
POLR2AP24928 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.61□□□□□ -1.19
POLR2AP24928 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
POLR2AP24928 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
POLR2AP24928 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
POLR2AP24928 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
POLR2AP24928 MBP-206ENST00000397863 4800 ntTSL 3 BASIC7.61□□□□□ -1.19
POLR2AP24928 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms