Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC018475.1-201ENST00000478358 465 ntBASIC5.85□□□□□ -1.47
UBCP0CG48 AL135933.1-201ENST00000498657 802 ntBASIC5.85□□□□□ -1.47
UBCP0CG48 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
UBCP0CG48 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.85□□□□□ -1.47
UBCP0CG48 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.85□□□□□ -1.47
UBCP0CG48 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC5.85□□□□□ -1.47
UBCP0CG48 OR52K3P-201ENST00000531655 943 ntBASIC5.85□□□□□ -1.47
UBCP0CG48 SSU72P6-201ENST00000532644 488 ntBASIC5.85□□□□□ -1.47
UBCP0CG48 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
UBCP0CG48 AC024614.1-201ENST00000577546 307 ntBASIC5.85□□□□□ -1.47
UBCP0CG48 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC5.85□□□□□ -1.47
UBCP0CG48 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.85□□□□□ -1.47
UBCP0CG48 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
UBCP0CG48 AC025171.4-201ENST00000607250 1047 ntBASIC5.85□□□□□ -1.47
UBCP0CG48 AC004836.1-201ENST00000623032 634 ntBASIC5.85□□□□□ -1.47
UBCP0CG48 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.85□□□□□ -1.47
UBCP0CG48 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
UBCP0CG48 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.85□□□□□ -1.47
UBCP0CG48 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
UBCP0CG48 AC011504.1-201ENST00000623331 4103 ntBASIC5.85□□□□□ -1.47
UBCP0CG48 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
UBCP0CG48 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
UBCP0CG48 AC006511.3-201ENST00000624929 1783 ntBASIC5.85□□□□□ -1.47
UBCP0CG48 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
UBCP0CG48 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
UBCP0CG48 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
UBCP0CG48 AC130360.2-201ENST00000533477 1556 ntBASIC5.84□□□□□ -1.47
UBCP0CG48 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
UBCP0CG48 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.84□□□□□ -1.47
UBCP0CG48 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.84□□□□□ -1.47
UBCP0CG48 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
UBCP0CG48 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
UBCP0CG48 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.84□□□□□ -1.47
UBCP0CG48 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
UBCP0CG48 GOT2P1-201ENST00000440922 1309 ntBASIC5.84□□□□□ -1.47
UBCP0CG48 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
UBCP0CG48 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
UBCP0CG48 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
UBCP0CG48 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
UBCP0CG48 RN7SKP118-201ENST00000364331 330 ntBASIC5.84□□□□□ -1.47
UBCP0CG48 RN7SKP1-201ENST00000365525 307 ntBASIC5.84□□□□□ -1.47
UBCP0CG48 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
UBCP0CG48 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC5.84□□□□□ -1.47
UBCP0CG48 RNU1-46P-201ENST00000384425 164 ntBASIC5.84□□□□□ -1.47
UBCP0CG48 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC5.84□□□□□ -1.47
UBCP0CG48 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.84□□□□□ -1.47
UBCP0CG48 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC5.84□□□□□ -1.47
UBCP0CG48 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC5.84□□□□□ -1.47
UBCP0CG48 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.84□□□□□ -1.47
UBCP0CG48 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC5.84□□□□□ -1.47
UBCP0CG48 SRP68P2-201ENST00000456184 254 ntBASIC5.84□□□□□ -1.47
UBCP0CG48 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC5.84□□□□□ -1.47
UBCP0CG48 PPP1R2P6-201ENST00000478565 588 ntBASIC5.84□□□□□ -1.47
UBCP0CG48 RN7SL654P-201ENST00000479178 292 ntBASIC5.84□□□□□ -1.47
UBCP0CG48 AC139713.1-202ENST00000512366 460 ntBASIC5.84□□□□□ -1.47
UBCP0CG48 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC5.84□□□□□ -1.47
UBCP0CG48 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC5.84□□□□□ -1.47
UBCP0CG48 IGHVIII-25-1-201ENST00000522143 241 ntBASIC5.84□□□□□ -1.47
UBCP0CG48 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC5.84□□□□□ -1.47
UBCP0CG48 AC090115.2-201ENST00000548060 883 ntBASIC5.84□□□□□ -1.47
UBCP0CG48 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC5.84□□□□□ -1.47
UBCP0CG48 AC011921.2-201ENST00000589465 152 ntBASIC5.84□□□□□ -1.47
UBCP0CG48 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.84□□□□□ -1.47
UBCP0CG48 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC5.84□□□□□ -1.47
UBCP0CG48 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.84□□□□□ -1.47
UBCP0CG48 SNORA16A-202ENST00000628458 135 ntBASIC5.84□□□□□ -1.47
UBCP0CG48 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC5.84□□□□□ -1.47
UBCP0CG48 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
UBCP0CG48 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
UBCP0CG48 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.84□□□□□ -1.47
UBCP0CG48 AC062022.1-201ENST00000451026 1684 ntBASIC5.84□□□□□ -1.47
UBCP0CG48 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
UBCP0CG48 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
UBCP0CG48 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
UBCP0CG48 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.84□□□□□ -1.47
UBCP0CG48 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
UBCP0CG48 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
UBCP0CG48 AC005332.9-201ENST00000620266 2921 ntBASIC5.84□□□□□ -1.48
UBCP0CG48 AL162456.1-201ENST00000634535 2006 ntBASIC5.84□□□□□ -1.48
UBCP0CG48 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
UBCP0CG48 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
UBCP0CG48 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.83□□□□□ -1.48
UBCP0CG48 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
UBCP0CG48 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
UBCP0CG48 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.83□□□□□ -1.48
UBCP0CG48 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
UBCP0CG48 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
UBCP0CG48 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
UBCP0CG48 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.83□□□□□ -1.48
UBCP0CG48 AC093297.3-201ENST00000607056 2517 ntBASIC5.83□□□□□ -1.48
UBCP0CG48 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
UBCP0CG48 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.83□□□□□ -1.48
UBCP0CG48 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
UBCP0CG48 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
UBCP0CG48 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
UBCP0CG48 CASC19-228ENST00000641414 1684 ntBASIC5.83□□□□□ -1.48
UBCP0CG48 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.83□□□□□ -1.48
UBCP0CG48 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
UBCP0CG48 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
UBCP0CG48 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms