Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COPS3Q9UNS2 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COPS3Q9UNS2 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COPS3Q9UNS2 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.96□□□□□ -1.46
COPS3Q9UNS2 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.96□□□□□ -1.46
COPS3Q9UNS2 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
COPS3Q9UNS2 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
COPS3Q9UNS2 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.96□□□□□ -1.46
COPS3Q9UNS2 MTCO1P25-201ENST00000414449 1799 ntBASIC5.95□□□□□ -1.46
COPS3Q9UNS2 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 RPL31-202ENST00000409000 641 ntTSL 2 BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 PRKAR1AP1-201ENST00000441422 1162 ntBASIC5.95□□□□□ -1.46
COPS3Q9UNS2 AL139135.2-201ENST00000445040 433 ntBASIC5.95□□□□□ -1.46
COPS3Q9UNS2 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 RN7SL91P-201ENST00000469313 291 ntBASIC5.95□□□□□ -1.46
COPS3Q9UNS2 AC018475.1-201ENST00000478358 465 ntBASIC5.95□□□□□ -1.46
COPS3Q9UNS2 RPL23AP68-201ENST00000480924 445 ntBASIC5.95□□□□□ -1.46
COPS3Q9UNS2 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 SCARNA18.2-201ENST00000516882 84 ntBASIC5.95□□□□□ -1.46
COPS3Q9UNS2 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 IGLV3-6-201ENST00000523937 250 ntBASIC5.95□□□□□ -1.46
COPS3Q9UNS2 PHBP2-201ENST00000532859 806 ntBASIC5.95□□□□□ -1.46
COPS3Q9UNS2 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 LDHC-204ENST00000536880 957 ntTSL 5 BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 AC104117.5-201ENST00000606195 547 ntBASIC5.95□□□□□ -1.46
COPS3Q9UNS2 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 MIR6737-201ENST00000617385 70 ntBASIC5.95□□□□□ -1.46
COPS3Q9UNS2 AL157762.1-201ENST00000619612 415 ntBASIC5.95□□□□□ -1.46
COPS3Q9UNS2 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 FKBP1AP4-201ENST00000631775 336 ntBASIC5.95□□□□□ -1.46
COPS3Q9UNS2 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 AC067942.1-201ENST00000488045 1493 ntBASIC5.95□□□□□ -1.46
COPS3Q9UNS2 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
COPS3Q9UNS2 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 AL049869.1-201ENST00000556933 1402 ntBASIC5.94□□□□□ -1.46
COPS3Q9UNS2 PWRN1-212ENST00000569908 1435 ntBASIC5.94□□□□□ -1.46
COPS3Q9UNS2 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 AC011504.1-201ENST00000623331 4103 ntBASIC5.94□□□□□ -1.46
COPS3Q9UNS2 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 RNA5SP114-201ENST00000363780 113 ntBASIC5.94□□□□□ -1.46
COPS3Q9UNS2 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 GAPDHP69-201ENST00000425504 1008 ntBASIC5.94□□□□□ -1.46
COPS3Q9UNS2 RPL23AP28-201ENST00000448062 470 ntBASIC5.94□□□□□ -1.46
COPS3Q9UNS2 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 PPP1R2P6-201ENST00000478565 588 ntBASIC5.94□□□□□ -1.46
COPS3Q9UNS2 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 KCTD9P4-201ENST00000526766 1166 ntBASIC5.94□□□□□ -1.46
COPS3Q9UNS2 SSU72P6-201ENST00000532644 488 ntBASIC5.94□□□□□ -1.46
COPS3Q9UNS2 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 AC140063.1-201ENST00000541343 259 ntBASIC5.94□□□□□ -1.46
COPS3Q9UNS2 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 MIR1273F-201ENST00000580581 99 ntBASIC5.94□□□□□ -1.46
COPS3Q9UNS2 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.94□□□□□ -1.46
COPS3Q9UNS2 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COPS3Q9UNS2 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms