Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 PABPC1P10-201ENST00000464731 381 ntBASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 TECRP2-201ENST00000503270 928 ntBASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 LINC01085-203ENST00000511195 326 ntBASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 MTCO3P27-201ENST00000514397 196 ntBASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 SUMO2P19-201ENST00000518920 295 ntBASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 HNRNPCP8-201ENST00000528764 888 ntBASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 OR4C1P-201ENST00000530880 937 ntBASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 OSBPL9P3-201ENST00000534523 595 ntBASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 LRRC34P1-201ENST00000542742 915 ntBASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 AC098935.2-201ENST00000604222 466 ntBASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 AC012510.1-201ENST00000607946 759 ntBASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 AL137246.2-201ENST00000613439 662 ntBASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 AC022306.1-201ENST00000560489 1562 ntBASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.42□□□□□ -1.22
PPARGC1AQ9UBK2 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 AL391262.1-201ENST00000556558 1992 ntBASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 OR7A2P-201ENST00000304105 930 ntBASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 U3.14-201ENST00000365363 227 ntBASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 AL157698.1-201ENST00000415190 1011 ntBASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 HCG25-217ENST00000422366 702 ntTSL 3 BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 AC009237.1-201ENST00000442127 744 ntBASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 RPL21P33-201ENST00000444831 484 ntBASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 METTL15P1-201ENST00000481421 1045 ntBASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 RN7SL797P-201ENST00000486314 297 ntBASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 AC055733.3-201ENST00000505214 523 ntBASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 RNU6-334P-201ENST00000517072 102 ntBASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 EEF1A1P37-201ENST00000522748 715 ntBASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 SOX5P1-201ENST00000524155 1127 ntBASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 ZKSCAN7P1-201ENST00000543668 673 ntBASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 AL031846.1-201ENST00000560933 314 ntBASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 AC007275.1-201ENST00000621243 671 ntBASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 AP003499.2-201ENST00000624100 483 ntBASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PPARGC1AQ9UBK2 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms