Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 OR52K3P-201ENST00000531655 943 ntBASIC6.88□□□□□ -1.31
PCDH9Q9HC56 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 AC140063.1-201ENST00000541343 259 ntBASIC6.88□□□□□ -1.31
PCDH9Q9HC56 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 AC100832.2-201ENST00000582080 776 ntBASIC6.88□□□□□ -1.31
PCDH9Q9HC56 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 AC011497.2-201ENST00000600255 639 ntBASIC6.88□□□□□ -1.31
PCDH9Q9HC56 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 AC091193.1-201ENST00000604640 448 ntBASIC6.88□□□□□ -1.31
PCDH9Q9HC56 AC139792.1-201ENST00000607051 647 ntBASIC6.88□□□□□ -1.31
PCDH9Q9HC56 AC004241.2-201ENST00000614562 444 ntBASIC6.88□□□□□ -1.31
PCDH9Q9HC56 AC012254.5-201ENST00000623573 478 ntBASIC6.88□□□□□ -1.31
PCDH9Q9HC56 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDH9Q9HC56 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 AC005332.9-201ENST00000620266 2921 ntBASIC6.87□□□□□ -1.31
PCDH9Q9HC56 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 RNA5SP152-201ENST00000365184 110 ntBASIC6.87□□□□□ -1.31
PCDH9Q9HC56 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 AL049697.3-201ENST00000406493 982 ntBASIC6.87□□□□□ -1.31
PCDH9Q9HC56 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 RPL18AP14-201ENST00000417685 526 ntBASIC6.87□□□□□ -1.31
PCDH9Q9HC56 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 AC092824.1-201ENST00000483524 576 ntBASIC6.87□□□□□ -1.31
PCDH9Q9HC56 AC018639.1-201ENST00000492994 442 ntBASIC6.87□□□□□ -1.31
PCDH9Q9HC56 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 RNA5SP318-201ENST00000516352 92 ntBASIC6.87□□□□□ -1.31
PCDH9Q9HC56 AP005902.2-201ENST00000518393 307 ntBASIC6.87□□□□□ -1.31
PCDH9Q9HC56 IGKV2D-38-201ENST00000518423 240 ntBASIC6.87□□□□□ -1.31
PCDH9Q9HC56 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 MIR4312-201ENST00000579909 76 ntBASIC6.87□□□□□ -1.31
PCDH9Q9HC56 AC106782.7-201ENST00000624024 418 ntBASIC6.87□□□□□ -1.31
PCDH9Q9HC56 AC133555.5-201ENST00000624430 418 ntBASIC6.87□□□□□ -1.31
PCDH9Q9HC56 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 AC010168.2-201ENST00000562691 5428 ntBASIC6.87□□□□□ -1.31
PCDH9Q9HC56 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.87□□□□□ -1.31
PCDH9Q9HC56 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PCDH9Q9HC56 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.86□□□□□ -1.31
PCDH9Q9HC56 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.86□□□□□ -1.31
PCDH9Q9HC56 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
PCDH9Q9HC56 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.86□□□□□ -1.31
PCDH9Q9HC56 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.86□□□□□ -1.31
PCDH9Q9HC56 MKI67P1-201ENST00000604297 1460 ntBASIC6.86□□□□□ -1.31
PCDH9Q9HC56 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.86□□□□□ -1.31
PCDH9Q9HC56 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PCDH9Q9HC56 DOCK11P1-201ENST00000553480 5932 ntBASIC6.86□□□□□ -1.31
PCDH9Q9HC56 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
PCDH9Q9HC56 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.86□□□□□ -1.31
PCDH9Q9HC56 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.86□□□□□ -1.31
PCDH9Q9HC56 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
PCDH9Q9HC56 AL512353.3-201ENST00000417517 1326 ntBASIC6.86□□□□□ -1.31
PCDH9Q9HC56 AC022613.3-201ENST00000560740 1346 ntBASIC6.86□□□□□ -1.31
PCDH9Q9HC56 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
PCDH9Q9HC56 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PCDH9Q9HC56 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PCDH9Q9HC56 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PCDH9Q9HC56 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.86□□□□□ -1.31
PCDH9Q9HC56 RNU1-46P-201ENST00000384425 164 ntBASIC6.86□□□□□ -1.31
PCDH9Q9HC56 AL079341.1-201ENST00000404701 1207 ntBASIC6.86□□□□□ -1.31
PCDH9Q9HC56 RN7SKP91-201ENST00000410852 288 ntBASIC6.86□□□□□ -1.31
PCDH9Q9HC56 AL590128.1-201ENST00000433407 286 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms