Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 AL353743.4-201ENST00000422653 1547 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 LINC00955-202ENST00000514422 1502 ntTSL 4 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 RAB13-205ENST00000614713 1353 ntTSL 5 BASIC8.84□□□□□ -0.99
SCUBE3Q8IX30 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC8.84□□□□□ -1
SCUBE3Q8IX30 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC8.84□□□□□ -1
SCUBE3Q8IX30 ITIH2-201ENST00000358415 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SCUBE3Q8IX30 SLC9B2-201ENST00000362026 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SCUBE3Q8IX30 AL049833.3-201ENST00000623920 3738 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 CARF-216ENST00000444724 2854 ntTSL 1 (best) BASIC8.83□□□□□ -1
SCUBE3Q8IX30 ERCC8-201ENST00000265038 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SCUBE3Q8IX30 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
SCUBE3Q8IX30 PIGA-201ENST00000333590 3652 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SCUBE3Q8IX30 KLF5-205ENST00000539231 2951 ntTSL 1 (best) BASIC8.83□□□□□ -1
SCUBE3Q8IX30 SH3D19-204ENST00000427414 2656 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
SCUBE3Q8IX30 ADAM2-205ENST00000521880 2125 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 AC137056.2-201ENST00000624055 1958 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 ZNF45-206ENST00000615985 2912 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 GIMAP2-201ENST00000223293 1449 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SCUBE3Q8IX30 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SCUBE3Q8IX30 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC8.83□□□□□ -1
SCUBE3Q8IX30 GAGE2A-201ENST00000362097 528 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SCUBE3Q8IX30 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 NCSTNP1-201ENST00000406229 144 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 FTH1P26-201ENST00000406512 701 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 TPT1P2-201ENST00000413105 503 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 AC005999.1-201ENST00000414409 588 ntTSL 4 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 FKBP1AP3-201ENST00000423650 319 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 HSPD1P12-201ENST00000429127 1069 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 AL117338.1-201ENST00000434552 631 ntTSL 5 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 MTND1P28-201ENST00000435623 950 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 CHRM3-AS1-201ENST00000444721 486 ntTSL 2 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 AC090954.1-201ENST00000445502 361 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 BUD31P2-201ENST00000449374 300 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 PAX8-AS1-208ENST00000456685 1207 ntTSL 1 (best) BASIC8.83□□□□□ -1
SCUBE3Q8IX30 RN7SL63P-201ENST00000468228 304 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 RN7SL621P-201ENST00000472565 299 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 AC079841.1-201ENST00000481228 950 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 RPL23AP66-201ENST00000494341 479 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 AC138356.2-201ENST00000521192 667 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 FLJ46284-203ENST00000521230 407 ntTSL 3 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 RNF185-AS1-201ENST00000526089 353 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 TAPT1-AS1-203ENST00000573950 510 ntTSL 3 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 AC091147.1-201ENST00000583290 510 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC8.83□□□□□ -1
SCUBE3Q8IX30 AL161729.2-201ENST00000605700 456 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 AC073218.2-201ENST00000606468 295 ntTSL 5 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 AC010542.5-201ENST00000612427 382 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 FAM74A6-203ENST00000615956 481 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 AC009233.1-201ENST00000616477 371 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 MIR6736-201ENST00000616799 59 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 AL133370.2-201ENST00000619934 439 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 LINC01170-202ENST00000628324 650 ntTSL 2 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 LINC01778-208ENST00000635288 1095 ntTSL 5 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 AC112487.2-201ENST00000637950 304 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 AC099063.3-201ENST00000642066 185 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 MRRFP1-201ENST00000435941 1675 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 TRHR-202ENST00000518632 1660 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 ZNF33A-208ENST00000628825 2854 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 BTN2A1-203ENST00000429381 3113 ntTSL 1 (best) BASIC8.83□□□□□ -1
SCUBE3Q8IX30 AC130464.1-201ENST00000416201 1500 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC8.83□□□□□ -1
SCUBE3Q8IX30 AC000367.1-201ENST00000452711 1766 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SCUBE3Q8IX30 C2orf91-201ENST00000378711 3721 ntAPPRIS P2 TSL 2 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 AC015871.4-201ENST00000624650 2260 ntBASIC8.83□□□□□ -1
SCUBE3Q8IX30 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SCUBE3Q8IX30 CYP4A22-203ENST00000371891 2535 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
SCUBE3Q8IX30 ZNF225-206ENST00000592780 2538 ntTSL 5 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC8.83□□□□□ -1
SCUBE3Q8IX30 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC8.83□□□□□ -1
SCUBE3Q8IX30 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 LINC02102-201ENST00000503989 3364 ntTSL 2 BASIC8.82□□□□□ -1
SCUBE3Q8IX30 BRDT-204ENST00000394530 3207 ntTSL 2 BASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms