Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 AC011504.1-201ENST00000623331 4103 ntBASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 AP002370.1-201ENST00000528055 1602 ntBASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 AC006213.6-201ENST00000623722 4179 ntBASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 MIR301B-201ENST00000390813 78 ntBASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 PDCL3P5-201ENST00000398028 722 ntBASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 RN7SKP137-201ENST00000411074 307 ntBASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 MYB-206ENST00000420123 1051 ntTSL 5 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 SLC25A24P1-202ENST00000434803 1220 ntBASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 AC019185.3-201ENST00000438805 323 ntBASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 RPL5P15-201ENST00000475870 897 ntBASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 AC107952.1-201ENST00000524200 376 ntBASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 SNX18P10-201ENST00000625014 519 ntBASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 LINC01103-201ENST00000430551 1457 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 MTCO1P25-201ENST00000414449 1799 ntBASIC7.03□□□□□ -1.28
CCDC50Q8IVM0 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
CCDC50Q8IVM0 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC7.02□□□□□ -1.28
CCDC50Q8IVM0 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.28
CCDC50Q8IVM0 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 DLD-205ENST00000440410 1993 ntTSL 2 BASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 RNU1-55P-201ENST00000365510 158 ntBASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 EIF4A1P5-201ENST00000428062 1095 ntBASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 CENPN-204ENST00000428963 971 ntTSL 2 BASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 OR52U1P-201ENST00000439752 923 ntBASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 RPL23AP28-201ENST00000448062 470 ntBASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 AL139156.3-201ENST00000454802 394 ntBASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 AC079193.1-201ENST00000460497 588 ntBASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 CBX5P1-201ENST00000468470 561 ntBASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 RN7SL456P-201ENST00000469290 295 ntBASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 RN7SL776P-201ENST00000493390 268 ntBASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 SNORA58-201ENST00000505219 137 ntBASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
CCDC50Q8IVM0 IGLV3-6-201ENST00000523937 250 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms