Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 SLC25A24P1-202ENST00000434803 1220 ntBASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 H3F3BP1-201ENST00000440551 403 ntBASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 AL355355.1-201ENST00000442900 793 ntBASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 AL451063.1-201ENST00000450164 1133 ntBASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 PABPC1P10-201ENST00000464731 381 ntBASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 RN7SL145P-201ENST00000469955 296 ntBASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 AC092824.1-201ENST00000483524 576 ntBASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 RN7SL182P-201ENST00000496499 300 ntBASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 TECRP2-201ENST00000503270 928 ntBASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 SCARNA6-201ENST00000515982 265 ntBASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 IGHV3-57-201ENST00000520143 280 ntBASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 IGLV3-6-201ENST00000523937 250 ntBASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 HNRNPCP8-201ENST00000528764 888 ntBASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 REG4-204ENST00000530654 612 ntTSL 5 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 NXPE2P1-201ENST00000543705 726 ntBASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 AC090115.2-201ENST00000548060 883 ntBASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 AL929601.4-201ENST00000613011 1341 ntBASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 pRNA.9-201ENST00000618609 89 ntBASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 AC012254.5-201ENST00000623573 478 ntBASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.61□□□□□ -1.51
ANKRD55Q3KP44 NAMPTP1-201ENST00000440465 2514 ntBASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 AC068769.1-201ENST00000474767 2426 ntBASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 NCOA4P2-201ENST00000340589 1813 ntBASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 TUBBP10-201ENST00000427668 1301 ntBASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 YWHAZP5-201ENST00000419975 730 ntBASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 AC007568.1-201ENST00000422912 471 ntBASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 AL139415.1-201ENST00000424862 352 ntBASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 AC245452.2-201ENST00000435222 392 ntBASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 PHBP4-201ENST00000437447 837 ntBASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 AC018892.2-201ENST00000457656 693 ntBASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 RN7SL688P-201ENST00000471754 275 ntBASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 RN7SL392P-201ENST00000473024 299 ntBASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 AC105420.1-201ENST00000504389 582 ntBASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 RN7SKP242-201ENST00000515967 289 ntBASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC5.6□□□□□ -1.51
ANKRD55Q3KP44 AC079866.1-201ENST00000534985 1220 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms