Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC6.9□□□□□ -1.3
HTTP42858 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HTTP42858 NRXN3-217ENST00000634499 6069 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
HTTP42858 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HTTP42858 KIAA1671-203ENST00000406486 7864 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
HTTP42858 TXLNB-201ENST00000358430 4753 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HTTP42858 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
HTTP42858 DRAXIN-201ENST00000294485 7346 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HTTP42858 RAP1GAP2-202ENST00000366401 6616 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
HTTP42858 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HTTP42858 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
HTTP42858 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HTTP42858 RBBP4P4-201ENST00000398588 1289 ntBASIC6.9□□□□□ -1.3
HTTP42858 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.9□□□□□ -1.3
HTTP42858 CYCSP22-201ENST00000517555 339 ntBASIC6.9□□□□□ -1.3
HTTP42858 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.9□□□□□ -1.3
HTTP42858 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.9□□□□□ -1.3
HTTP42858 OR7A1P-202ENST00000641542 1158 ntBASIC6.9□□□□□ -1.3
HTTP42858 PCDH9-204ENST00000544246 6234 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HTTP42858 SLC7A6-201ENST00000219343 6251 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
HTTP42858 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
HTTP42858 POU6F1-202ENST00000389243 4698 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
HTTP42858 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
HTTP42858 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.9□□□□□ -1.31
HTTP42858 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC6.9□□□□□ -1.31
HTTP42858 TMEM167A-201ENST00000502346 4630 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
HTTP42858 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.31
HTTP42858 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
HTTP42858 MTHFD2P5-201ENST00000320415 844 ntBASIC6.9□□□□□ -1.31
HTTP42858 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
HTTP42858 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
HTTP42858 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
HTTP42858 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
HTTP42858 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.9□□□□□ -1.31
HTTP42858 CDK7P1-201ENST00000434574 693 ntBASIC6.9□□□□□ -1.31
HTTP42858 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC6.9□□□□□ -1.31
HTTP42858 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.9□□□□□ -1.31
HTTP42858 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC6.9□□□□□ -1.31
HTTP42858 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.9□□□□□ -1.31
HTTP42858 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.9□□□□□ -1.31
HTTP42858 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.89□□□□□ -1.31
HTTP42858 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
HTTP42858 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HTTP42858 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
HTTP42858 PCDH11Y-202ENST00000333703 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
HTTP42858 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
HTTP42858 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
HTTP42858 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.89□□□□□ -1.31
HTTP42858 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
HTTP42858 SMARCE1-202ENST00000348513 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HTTP42858 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
HTTP42858 AC020658.2-201ENST00000559030 4020 ntBASIC6.89□□□□□ -1.31
HTTP42858 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.89□□□□□ -1.31
HTTP42858 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.89□□□□□ -1.31
HTTP42858 AL662874.1-201ENST00000426065 230 ntBASIC6.89□□□□□ -1.31
HTTP42858 AC091390.1-201ENST00000433904 331 ntBASIC6.89□□□□□ -1.31
HTTP42858 Y_RNA.710-201ENST00000516975 110 ntBASIC6.89□□□□□ -1.31
HTTP42858 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.89□□□□□ -1.31
HTTP42858 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.89□□□□□ -1.31
HTTP42858 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.89□□□□□ -1.31
HTTP42858 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
HTTP42858 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
HTTP42858 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
HTTP42858 RAB28P1-201ENST00000411517 641 ntBASIC6.89□□□□□ -1.31
HTTP42858 RPL35AP24-201ENST00000413846 330 ntBASIC6.89□□□□□ -1.31
HTTP42858 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.89□□□□□ -1.31
HTTP42858 SEPT14P12-201ENST00000442280 560 ntBASIC6.89□□□□□ -1.31
HTTP42858 IGLV3-6-201ENST00000523937 250 ntBASIC6.89□□□□□ -1.31
HTTP42858 HMGN2P36-201ENST00000529541 409 ntBASIC6.89□□□□□ -1.31
HTTP42858 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.89□□□□□ -1.31
HTTP42858 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.89□□□□□ -1.31
HTTP42858 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC6.89□□□□□ -1.31
HTTP42858 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
HTTP42858 AP005139.1-201ENST00000580702 1647 ntBASIC6.89□□□□□ -1.31
HTTP42858 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
HTTP42858 XRCC6P5-201ENST00000435236 1795 ntBASIC6.88□□□□□ -1.31
HTTP42858 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
HTTP42858 NCKAP5-204ENST00000409213 2390 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
HTTP42858 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HTTP42858 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC6.88□□□□□ -1.31
HTTP42858 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
HTTP42858 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
HTTP42858 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HTTP42858 RNVU1-6-201ENST00000364688 164 ntBASIC6.88□□□□□ -1.31
HTTP42858 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.88□□□□□ -1.31
HTTP42858 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.88□□□□□ -1.31
HTTP42858 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.88□□□□□ -1.31
HTTP42858 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HTTP42858 EPHA5-205ENST00000613740 8355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
HTTP42858 HTR2A-201ENST00000378688 4835 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HTTP42858 PDCD11-201ENST00000369797 6453 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HTTP42858 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HTTP42858 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HTTP42858 MTERF4-222ENST00000614476 4524 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HTTP42858 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HTTP42858 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HTTP42858 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.88□□□□□ -1.31
HTTP42858 PPIAP10-201ENST00000438675 458 ntBASIC6.88□□□□□ -1.31
HTTP42858 AL445466.1-201ENST00000448432 357 ntBASIC6.88□□□□□ -1.31
HTTP42858 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms