Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC012354.1-201ENST00000425325 2685 ntTSL 3 BASIC8.98□□□□□ -0.97
ALDH1A1P00352 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
ALDH1A1P00352 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
ALDH1A1P00352 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ALDH1A1P00352 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ALDH1A1P00352 AC020951.1-201ENST00000624361 2271 ntBASIC8.98□□□□□ -0.97
ALDH1A1P00352 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
ALDH1A1P00352 EEF1A1P28-201ENST00000450915 1403 ntBASIC8.97□□□□□ -0.97
ALDH1A1P00352 MTND5P12-201ENST00000502851 1449 ntBASIC8.97□□□□□ -0.97
ALDH1A1P00352 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
ALDH1A1P00352 FAM47C-201ENST00000358047 3270 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
ALDH1A1P00352 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
ALDH1A1P00352 MRNIP-204ENST00000518219 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
ALDH1A1P00352 ZNF726-201ENST00000322487 2330 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
ALDH1A1P00352 LINC01258-201ENST00000512517 2059 ntTSL 2 BASIC8.97□□□□□ -0.97
ALDH1A1P00352 API5P1-201ENST00000424316 1510 ntBASIC8.97□□□□□ -0.97
ALDH1A1P00352 KDELC1P1-201ENST00000512118 1509 ntBASIC8.97□□□□□ -0.97
ALDH1A1P00352 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC8.97□□□□□ -0.97
ALDH1A1P00352 PRRG1-208ENST00000542554 4600 ntAPPRIS P1 TSL 4 BASIC8.97□□□□□ -0.97
ALDH1A1P00352 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC8.97□□□□□ -0.97
ALDH1A1P00352 RNA5SP260-201ENST00000363849 111 ntBASIC8.97□□□□□ -0.97
ALDH1A1P00352 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC8.97□□□□□ -0.97
ALDH1A1P00352 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
ALDH1A1P00352 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
ALDH1A1P00352 AL451061.1-201ENST00000407887 862 ntBASIC8.97□□□□□ -0.97
ALDH1A1P00352 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC8.97□□□□□ -0.97
ALDH1A1P00352 FAM183DP-201ENST00000421987 399 ntBASIC8.97□□□□□ -0.97
ALDH1A1P00352 CYP4F34P-201ENST00000425951 481 ntBASIC8.97□□□□□ -0.97
ALDH1A1P00352 FGF12-202ENST00000430714 603 ntTSL 2 BASIC8.97□□□□□ -0.97
ALDH1A1P00352 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC8.97□□□□□ -0.97
ALDH1A1P00352 ARPC3P1-201ENST00000437218 533 ntBASIC8.97□□□□□ -0.97
ALDH1A1P00352 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
ALDH1A1P00352 MTND1P18-201ENST00000448191 573 ntBASIC8.97□□□□□ -0.97
ALDH1A1P00352 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC8.97□□□□□ -0.97
ALDH1A1P00352 AL357037.1-201ENST00000454758 322 ntBASIC8.97□□□□□ -0.97
ALDH1A1P00352 RN7SL791P-201ENST00000467868 295 ntBASIC8.97□□□□□ -0.97
ALDH1A1P00352 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC8.97□□□□□ -0.97
ALDH1A1P00352 RPL37P25-201ENST00000507308 276 ntBASIC8.97□□□□□ -0.97
ALDH1A1P00352 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC8.97□□□□□ -0.97
ALDH1A1P00352 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC8.97□□□□□ -0.97
ALDH1A1P00352 CHEK2P2-201ENST00000554701 672 ntBASIC8.97□□□□□ -0.97
ALDH1A1P00352 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC8.97□□□□□ -0.97
ALDH1A1P00352 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC8.97□□□□□ -0.97
ALDH1A1P00352 AC090912.1-201ENST00000578831 570 ntTSL 4 BASIC8.97□□□□□ -0.97
ALDH1A1P00352 AC015802.2-201ENST00000589690 189 ntBASIC8.97□□□□□ -0.97
ALDH1A1P00352 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC8.97□□□□□ -0.97
ALDH1A1P00352 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC8.97□□□□□ -0.97
ALDH1A1P00352 AC069545.1-201ENST00000605671 358 ntBASIC8.97□□□□□ -0.97
ALDH1A1P00352 Y_RNA.804-201ENST00000615262 101 ntBASIC8.97□□□□□ -0.97
ALDH1A1P00352 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC8.97□□□□□ -0.97
ALDH1A1P00352 AL590410.1-201ENST00000617925 333 ntBASIC8.97□□□□□ -0.97
ALDH1A1P00352 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
ALDH1A1P00352 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC8.97□□□□□ -0.97
ALDH1A1P00352 ASNSD1-201ENST00000260952 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
ALDH1A1P00352 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
ALDH1A1P00352 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC8.97□□□□□ -0.97
ALDH1A1P00352 OR8G3P-203ENST00000641848 1344 ntBASIC8.97□□□□□ -0.97
ALDH1A1P00352 AC092447.7-201ENST00000422212 1621 ntBASIC8.97□□□□□ -0.97
ALDH1A1P00352 YAP1-203ENST00000524575 1638 ntTSL 2 BASIC8.97□□□□□ -0.97
ALDH1A1P00352 AP005139.1-201ENST00000580702 1647 ntBASIC8.97□□□□□ -0.97
ALDH1A1P00352 AL133243.2-201ENST00000610331 1621 ntBASIC8.97□□□□□ -0.97
ALDH1A1P00352 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
ALDH1A1P00352 AC009163.7-201ENST00000621929 2557 ntBASIC8.97□□□□□ -0.97
ALDH1A1P00352 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
ALDH1A1P00352 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
ALDH1A1P00352 EEF1A1P4-201ENST00000359165 1405 ntBASIC8.97□□□□□ -0.97
ALDH1A1P00352 SPATA31A3-201ENST00000428649 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
ALDH1A1P00352 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
ALDH1A1P00352 SPATA31A5-201ENST00000437823 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
ALDH1A1P00352 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC8.96□□□□□ -0.97
ALDH1A1P00352 SLC2A3P4-201ENST00000521259 1471 ntBASIC8.96□□□□□ -0.97
ALDH1A1P00352 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
ALDH1A1P00352 CREB1-201ENST00000353267 7588 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
ALDH1A1P00352 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC8.96□□□□□ -0.97
ALDH1A1P00352 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
ALDH1A1P00352 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
ALDH1A1P00352 RAP2C-205ENST00000620646 3341 ntTSL 5 BASIC8.96□□□□□ -0.97
ALDH1A1P00352 ZBTB43-203ENST00000449886 5851 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.97
ALDH1A1P00352 SMC6-207ENST00000448223 5233 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
ALDH1A1P00352 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC8.96□□□□□ -0.98
ALDH1A1P00352 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
ALDH1A1P00352 RBMX2P2-201ENST00000257020 946 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
ALDH1A1P00352 SNORA72.1-201ENST00000363485 129 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 Y_RNA.359-201ENST00000365498 102 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 RNU1-11P-201ENST00000383975 164 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.98
ALDH1A1P00352 CAV1-204ENST00000393470 598 ntTSL 4 BASIC8.96□□□□□ -0.98
ALDH1A1P00352 RAB5CP1-201ENST00000395972 580 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 ATP5F1P4-201ENST00000397288 746 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 PTMAP8-201ENST00000397729 342 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 C1DP2-201ENST00000418167 426 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC8.96□□□□□ -0.98
ALDH1A1P00352 PIGX-204ENST00000421265 677 ntTSL 2 BASIC8.96□□□□□ -0.98
ALDH1A1P00352 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC8.96□□□□□ -0.98
ALDH1A1P00352 BX119904.1-201ENST00000432026 348 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC8.96□□□□□ -0.98
ALDH1A1P00352 NANOGP2-201ENST00000435391 727 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 AC000041.1-201ENST00000439655 175 ntBASIC8.96□□□□□ -0.98
ALDH1A1P00352 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC8.96□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms