Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 AC087072.2-201ENST00000621060 682 ntBASIC8.05□□□□□ -1.12
UPF2Q9HAU5 AC012629.3-201ENST00000623397 328 ntBASIC8.05□□□□□ -1.12
UPF2Q9HAU5 AL132640.3-201ENST00000630473 177 ntBASIC8.05□□□□□ -1.12
UPF2Q9HAU5 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 AC105235.1-201ENST00000623208 1816 ntBASIC8.05□□□□□ -1.12
UPF2Q9HAU5 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
UPF2Q9HAU5 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC8.04□□□□□ -1.12
UPF2Q9HAU5 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
UPF2Q9HAU5 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC8.04□□□□□ -1.12
UPF2Q9HAU5 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
UPF2Q9HAU5 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
UPF2Q9HAU5 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC8.04□□□□□ -1.12
UPF2Q9HAU5 RNA5SP114-201ENST00000363780 113 ntBASIC8.04□□□□□ -1.12
UPF2Q9HAU5 RNU12-2P-201ENST00000364789 156 ntBASIC8.04□□□□□ -1.12
UPF2Q9HAU5 RNA5SP474-201ENST00000391234 90 ntBASIC8.04□□□□□ -1.12
UPF2Q9HAU5 AL360271.1-201ENST00000395679 510 ntBASIC8.04□□□□□ -1.12
UPF2Q9HAU5 NRIR-202ENST00000414795 506 ntTSL 3 BASIC8.04□□□□□ -1.12
UPF2Q9HAU5 RPL23AP28-201ENST00000448062 470 ntBASIC8.04□□□□□ -1.12
UPF2Q9HAU5 AL096803.1-201ENST00000456921 1021 ntBASIC8.04□□□□□ -1.12
UPF2Q9HAU5 AL928654.1-201ENST00000476081 354 ntBASIC8.04□□□□□ -1.12
UPF2Q9HAU5 RN7SL654P-201ENST00000479178 292 ntBASIC8.04□□□□□ -1.12
UPF2Q9HAU5 AC091965.3-201ENST00000506236 208 ntBASIC8.04□□□□□ -1.12
UPF2Q9HAU5 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC8.04□□□□□ -1.12
UPF2Q9HAU5 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC8.04□□□□□ -1.12
UPF2Q9HAU5 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC8.04□□□□□ -1.12
UPF2Q9HAU5 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC8.04□□□□□ -1.12
UPF2Q9HAU5 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC8.04□□□□□ -1.12
UPF2Q9HAU5 ZNF806-201ENST00000438300 1774 ntBASIC8.04□□□□□ -1.12
UPF2Q9HAU5 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
UPF2Q9HAU5 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
UPF2Q9HAU5 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC8.04□□□□□ -1.12
UPF2Q9HAU5 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
UPF2Q9HAU5 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
UPF2Q9HAU5 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
UPF2Q9HAU5 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 AC011504.1-201ENST00000623331 4103 ntBASIC8.03□□□□□ -1.12
UPF2Q9HAU5 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 SNORA70.9-201ENST00000384370 135 ntBASIC8.03□□□□□ -1.12
UPF2Q9HAU5 MIR128-2-201ENST00000384893 84 ntBASIC8.03□□□□□ -1.12
UPF2Q9HAU5 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 AC007790.1-201ENST00000439081 782 ntBASIC8.03□□□□□ -1.12
UPF2Q9HAU5 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 PPP1R2P6-201ENST00000478565 588 ntBASIC8.03□□□□□ -1.12
UPF2Q9HAU5 RPL7AP23-201ENST00000482625 776 ntBASIC8.03□□□□□ -1.12
UPF2Q9HAU5 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 MTCYBP44-201ENST00000514835 823 ntBASIC8.03□□□□□ -1.12
UPF2Q9HAU5 RN7SKP67-201ENST00000515905 235 ntBASIC8.03□□□□□ -1.12
UPF2Q9HAU5 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 AC140063.1-201ENST00000541343 259 ntBASIC8.03□□□□□ -1.12
UPF2Q9HAU5 AC073916.1-201ENST00000545095 130 ntBASIC8.03□□□□□ -1.12
UPF2Q9HAU5 RBM7-208ENST00000545678 867 ntTSL 3 BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 AC091304.4-201ENST00000565703 620 ntBASIC8.03□□□□□ -1.12
UPF2Q9HAU5 MIR3159-201ENST00000584572 74 ntBASIC8.03□□□□□ -1.12
UPF2Q9HAU5 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 AL590032.1-201ENST00000604920 252 ntBASIC8.03□□□□□ -1.12
UPF2Q9HAU5 AC024589.2-201ENST00000605642 1294 ntBASIC8.03□□□□□ -1.12
UPF2Q9HAU5 AC005277.2-201ENST00000617898 390 ntBASIC8.03□□□□□ -1.12
UPF2Q9HAU5 KDM5DP1-201ENST00000622542 298 ntBASIC8.03□□□□□ -1.12
UPF2Q9HAU5 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 AC005225.5-201ENST00000623547 2225 ntBASIC8.03□□□□□ -1.12
UPF2Q9HAU5 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC8.03□□□□□ -1.12
UPF2Q9HAU5 LINC01616-201ENST00000561816 2280 ntBASIC8.03□□□□□ -1.12
UPF2Q9HAU5 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC8.02□□□□□ -1.12
UPF2Q9HAU5 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC8.02□□□□□ -1.12
UPF2Q9HAU5 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
UPF2Q9HAU5 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC8.02□□□□□ -1.12
UPF2Q9HAU5 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
UPF2Q9HAU5 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
UPF2Q9HAU5 CREM-217ENST00000439705 2306 ntTSL 5 BASIC8.02□□□□□ -1.13
UPF2Q9HAU5 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
UPF2Q9HAU5 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
UPF2Q9HAU5 POT1-202ENST00000393329 3950 ntTSL 5 BASIC8.02□□□□□ -1.13
UPF2Q9HAU5 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
UPF2Q9HAU5 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
UPF2Q9HAU5 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
UPF2Q9HAU5 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
UPF2Q9HAU5 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms