Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 NDUFA5P1-201ENST00000433858 341 ntBASIC6.79□□□□□ -1.32
RNF31Q96EP0 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RNF31Q96EP0 AC009237.4-201ENST00000441078 238 ntBASIC6.79□□□□□ -1.32
RNF31Q96EP0 BX005266.3-201ENST00000443013 1075 ntBASIC6.79□□□□□ -1.32
RNF31Q96EP0 GAPDHP53-201ENST00000458397 924 ntBASIC6.79□□□□□ -1.32
RNF31Q96EP0 EIF2S2P4-201ENST00000461070 984 ntBASIC6.79□□□□□ -1.32
RNF31Q96EP0 HMGN1P8-201ENST00000463578 288 ntBASIC6.79□□□□□ -1.32
RNF31Q96EP0 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF31Q96EP0 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF31Q96EP0 AC026407.1-201ENST00000518369 204 ntBASIC6.79□□□□□ -1.32
RNF31Q96EP0 IGKV2D-38-201ENST00000518423 240 ntBASIC6.79□□□□□ -1.32
RNF31Q96EP0 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.79□□□□□ -1.32
RNF31Q96EP0 NATP-201ENST00000523491 878 ntBASIC6.79□□□□□ -1.32
RNF31Q96EP0 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF31Q96EP0 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF31Q96EP0 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RNF31Q96EP0 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC6.79□□□□□ -1.32
RNF31Q96EP0 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC6.79□□□□□ -1.32
RNF31Q96EP0 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC6.79□□□□□ -1.32
RNF31Q96EP0 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF31Q96EP0 AC096947.1-201ENST00000603233 470 ntBASIC6.79□□□□□ -1.32
RNF31Q96EP0 MIR6885-201ENST00000612241 66 ntBASIC6.79□□□□□ -1.32
RNF31Q96EP0 AC108359.1-201ENST00000616451 1211 ntBASIC6.79□□□□□ -1.32
RNF31Q96EP0 AC009032.1-201ENST00000617574 431 ntBASIC6.79□□□□□ -1.32
RNF31Q96EP0 AC005753.1-201ENST00000623837 618 ntBASIC6.79□□□□□ -1.32
RNF31Q96EP0 AC005858.3-201ENST00000624756 589 ntBASIC6.79□□□□□ -1.32
RNF31Q96EP0 AC027559.1-201ENST00000636288 271 ntBASIC6.79□□□□□ -1.32
RNF31Q96EP0 AC007603.3-201ENST00000636915 979 ntBASIC6.79□□□□□ -1.32
RNF31Q96EP0 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.79□□□□□ -1.32
RNF31Q96EP0 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF31Q96EP0 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RNF31Q96EP0 AL358913.2-201ENST00000553881 1548 ntBASIC6.79□□□□□ -1.32
RNF31Q96EP0 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
RNF31Q96EP0 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
RNF31Q96EP0 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.79□□□□□ -1.32
RNF31Q96EP0 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.79□□□□□ -1.32
RNF31Q96EP0 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
RNF31Q96EP0 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
RNF31Q96EP0 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF31Q96EP0 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.78□□□□□ -1.32
RNF31Q96EP0 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
RNF31Q96EP0 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF31Q96EP0 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RNF31Q96EP0 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF31Q96EP0 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF31Q96EP0 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF31Q96EP0 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RNF31Q96EP0 SPATA31C1-201ENST00000420021 3895 ntBASIC6.78□□□□□ -1.32
RNF31Q96EP0 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RNF31Q96EP0 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.78□□□□□ -1.32
RNF31Q96EP0 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF31Q96EP0 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC6.78□□□□□ -1.32
RNF31Q96EP0 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
RNF31Q96EP0 AP001002.1-201ENST00000625148 1513 ntBASIC6.78□□□□□ -1.32
RNF31Q96EP0 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.78□□□□□ -1.32
RNF31Q96EP0 RNU12-2P-201ENST00000364789 156 ntBASIC6.78□□□□□ -1.32
RNF31Q96EP0 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF31Q96EP0 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.78□□□□□ -1.32
RNF31Q96EP0 RNA5SP176-201ENST00000390956 110 ntBASIC6.78□□□□□ -1.32
RNF31Q96EP0 AC121334.1-201ENST00000396414 802 ntBASIC6.78□□□□□ -1.32
RNF31Q96EP0 AL607077.1-201ENST00000401718 499 ntBASIC6.78□□□□□ -1.32
RNF31Q96EP0 ATP5F1P6-201ENST00000402768 767 ntBASIC6.78□□□□□ -1.32
RNF31Q96EP0 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
RNF31Q96EP0 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RNF31Q96EP0 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RNF31Q96EP0 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF31Q96EP0 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC6.78□□□□□ -1.32
RNF31Q96EP0 AL022324.2-201ENST00000434827 780 ntBASIC6.78□□□□□ -1.32
RNF31Q96EP0 AC013403.1-201ENST00000436954 263 ntBASIC6.78□□□□□ -1.32
RNF31Q96EP0 GAPDHP16-201ENST00000448152 962 ntBASIC6.78□□□□□ -1.32
RNF31Q96EP0 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF31Q96EP0 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF31Q96EP0 SRP68P2-201ENST00000456184 254 ntBASIC6.78□□□□□ -1.32
RNF31Q96EP0 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC6.78□□□□□ -1.32
RNF31Q96EP0 AC021074.2-201ENST00000468434 172 ntBASIC6.78□□□□□ -1.32
RNF31Q96EP0 RN7SL306P-201ENST00000492941 296 ntBASIC6.78□□□□□ -1.32
RNF31Q96EP0 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC6.78□□□□□ -1.32
RNF31Q96EP0 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF31Q96EP0 IGLVI-42-201ENST00000522485 381 ntBASIC6.78□□□□□ -1.32
RNF31Q96EP0 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.78□□□□□ -1.32
RNF31Q96EP0 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF31Q96EP0 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.78□□□□□ -1.32
RNF31Q96EP0 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF31Q96EP0 AL132657.2-201ENST00000564417 358 ntBASIC6.78□□□□□ -1.32
RNF31Q96EP0 PPIAP14-201ENST00000577627 496 ntBASIC6.78□□□□□ -1.32
RNF31Q96EP0 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF31Q96EP0 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC6.78□□□□□ -1.32
RNF31Q96EP0 AC040174.2-201ENST00000602701 465 ntBASIC6.78□□□□□ -1.32
RNF31Q96EP0 COX6CP16-201ENST00000603667 216 ntBASIC6.78□□□□□ -1.32
RNF31Q96EP0 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.78□□□□□ -1.32
RNF31Q96EP0 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF31Q96EP0 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.78□□□□□ -1.32
RNF31Q96EP0 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.78□□□□□ -1.32
RNF31Q96EP0 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF31Q96EP0 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RNF31Q96EP0 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RNF31Q96EP0 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF31Q96EP0 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF31Q96EP0 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF31Q96EP0 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms