Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HMCN2Q8NDA2 COL14A1-203ENST00000309791 6163 ntTSL 5 BASIC3.4□□□□□ -1.86
HMCN2Q8NDA2 SH3GLB1-201ENST00000370558 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HMCN2Q8NDA2 RNA5SP91-201ENST00000390902 119 ntBASIC3.4□□□□□ -1.86
HMCN2Q8NDA2 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC3.4□□□□□ -1.86
HMCN2Q8NDA2 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC3.4□□□□□ -1.86
HMCN2Q8NDA2 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC3.4□□□□□ -1.86
HMCN2Q8NDA2 AC022215.1-201ENST00000481770 362 ntBASIC3.4□□□□□ -1.86
HMCN2Q8NDA2 GTF2IP11-201ENST00000526931 420 ntBASIC3.4□□□□□ -1.86
HMCN2Q8NDA2 AC010463.3-201ENST00000594077 500 ntBASIC3.4□□□□□ -1.86
HMCN2Q8NDA2 MRPL57P1-201ENST00000621486 265 ntBASIC3.4□□□□□ -1.86
HMCN2Q8NDA2 NRAP-203ENST00000369358 5534 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HMCN2Q8NDA2 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC3.4□□□□□ -1.86
HMCN2Q8NDA2 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
HMCN2Q8NDA2 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC3.4□□□□□ -1.86
HMCN2Q8NDA2 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 ALB-209ENST00000503124 1741 ntTSL 5 BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 AL929601.3-201ENST00000613990 2086 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 SNORA70.4-201ENST00000365509 134 ntBASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 AL035419.1-201ENST00000397037 564 ntBASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 RPS27AP7-201ENST00000422792 455 ntBASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 AC005297.1-201ENST00000444765 862 ntBASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 AC109635.6-201ENST00000525487 1113 ntBASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 AP001858.2-201ENST00000536213 601 ntBASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 AC093283.1-201ENST00000565306 1075 ntBASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 AC011840.5-201ENST00000582125 771 ntBASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 RPL27-207ENST00000590864 569 ntTSL 2 BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 AC087283.1-201ENST00000604029 1074 ntBASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 CACNA1C-205ENST00000399591 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 CACNA1C-206ENST00000399595 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 PCDH12-201ENST00000231484 6562 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 RNA5SP305-201ENST00000362665 119 ntBASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 RNU105B-201ENST00000364478 208 ntBASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 DUTP5-201ENST00000406790 469 ntBASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 MIR1193-201ENST00000408109 78 ntBASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 ZDHHC20P1-204ENST00000435787 423 ntBASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 CYCSP29-201ENST00000533731 318 ntBASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 CYP4A44P-201ENST00000569984 154 ntBASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 AC090616.1-201ENST00000583895 447 ntBASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 AL356986.1-201ENST00000604085 341 ntBASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 AL021918.2-201ENST00000613415 194 ntBASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 ABCC11-202ENST00000356608 4612 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 CXCR4-201ENST00000241393 1682 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 AC137056.2-201ENST00000624055 1958 ntBASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 MAPK10-344ENST00000641718 3746 ntBASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 WDR11-201ENST00000263461 4732 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 CIC-204ENST00000572681 8218 ntTSL 5 BASIC3.4□□□□□ -1.87
HMCN2Q8NDA2 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC3.39□□□□□ -1.87
HMCN2Q8NDA2 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HMCN2Q8NDA2 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMCN2Q8NDA2 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HMCN2Q8NDA2 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMCN2Q8NDA2 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMCN2Q8NDA2 MAGI2-236ENST00000637441 5822 ntTSL 5 BASIC3.39□□□□□ -1.87
HMCN2Q8NDA2 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC3.39□□□□□ -1.87
HMCN2Q8NDA2 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HMCN2Q8NDA2 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMCN2Q8NDA2 ERMAP-201ENST00000328249 3949 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMCN2Q8NDA2 HMGN1P6-201ENST00000438508 291 ntBASIC3.39□□□□□ -1.87
HMCN2Q8NDA2 RPEP1-201ENST00000504507 658 ntBASIC3.39□□□□□ -1.87
HMCN2Q8NDA2 TVP23CP2-201ENST00000571473 623 ntBASIC3.39□□□□□ -1.87
HMCN2Q8NDA2 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC3.39□□□□□ -1.87
HMCN2Q8NDA2 AC135068.12-201ENST00000637370 931 ntBASIC3.39□□□□□ -1.87
HMCN2Q8NDA2 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMCN2Q8NDA2 ALPK1-205ENST00000504176 5203 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
HMCN2Q8NDA2 PCBP2-206ENST00000455667 2741 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMCN2Q8NDA2 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
HMCN2Q8NDA2 USP53-201ENST00000274030 5936 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMCN2Q8NDA2 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms