Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 RN7SKP11-201ENST00000517018 287 ntBASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 IGHVIII-47-1-201ENST00000518187 331 ntBASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 VDAC2P2-201ENST00000544463 901 ntBASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 AC007485.2-201ENST00000623493 1667 ntBASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CCDC50Q8IVM0 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 MAPK10-357ENST00000641831 2858 ntBASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 GAPDHP57-201ENST00000424400 585 ntBASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 PAICSP2-201ENST00000429118 1150 ntBASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 CR391992.1-201ENST00000438601 394 ntBASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 RPL6P24-201ENST00000445338 864 ntBASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 AL096803.1-201ENST00000456921 1021 ntBASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 SULT1D1P-201ENST00000458020 882 ntBASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 NQO1-205ENST00000561500 891 ntTSL 3 BASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 RN7SL697P-201ENST00000582484 299 ntBASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 MIR6726-201ENST00000613751 61 ntBASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 AL031658.2-201ENST00000616850 651 ntBASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 AC063923.1-201ENST00000478982 1619 ntBASIC7.05□□□□□ -1.28
CCDC50Q8IVM0 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 OR5M2P-202ENST00000641241 4242 ntBASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 AC007012.2-201ENST00000623206 1676 ntBASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 OR10D1P-201ENST00000355343 936 ntBASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 RN7SKP268-201ENST00000411107 316 ntBASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 RN7SKP30-201ENST00000411373 334 ntBASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 AL359633.1-201ENST00000421403 310 ntBASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 AL354714.5-201ENST00000450131 590 ntBASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 SRP68P2-201ENST00000456184 254 ntBASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 PPP1R2P6-201ENST00000478565 588 ntBASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 RN7SL518P-201ENST00000491887 280 ntBASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 SNX18P23-201ENST00000510867 677 ntBASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 MTCYBP44-201ENST00000514835 823 ntBASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 RNA5SP278-201ENST00000517055 102 ntBASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 MIR6731-201ENST00000614863 72 ntBASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 ENSA-215ENST00000638926 360 ntTSL 5 BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 MARK2P4-201ENST00000503381 2380 ntBASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CCDC50Q8IVM0 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms