Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ATP8A2-204ENST00000381655 9575 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS13CQ709C8 NCAM1-201ENST00000316851 5837 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS13CQ709C8 ACACB-202ENST00000377848 9247 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS13CQ709C8 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS13CQ709C8 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
VPS13CQ709C8 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS13CQ709C8 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS13CQ709C8 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.14□□□□□ -1.59
VPS13CQ709C8 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS13CQ709C8 AC091768.1-201ENST00000609258 930 ntBASIC5.14□□□□□ -1.59
VPS13CQ709C8 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS13CQ709C8 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS13CQ709C8 MAPK10-287ENST00000641217 3037 ntBASIC5.14□□□□□ -1.59
VPS13CQ709C8 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
VPS13CQ709C8 HSPA2-202ENST00000394709 5400 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS13CQ709C8 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS13CQ709C8 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS13CQ709C8 AL161912.4-201ENST00000623889 2468 ntBASIC5.14□□□□□ -1.59
VPS13CQ709C8 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VPS13CQ709C8 PLEC-204ENST00000354958 14751 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS13CQ709C8 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS13CQ709C8 SNORA70-201ENST00000384436 135 ntBASIC5.14□□□□□ -1.59
VPS13CQ709C8 BMS1P17-202ENST00000416720 316 ntBASIC5.14□□□□□ -1.59
VPS13CQ709C8 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS13CQ709C8 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS13CQ709C8 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS13CQ709C8 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS13CQ709C8 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS13CQ709C8 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC5.14□□□□□ -1.59
VPS13CQ709C8 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VPS13CQ709C8 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
VPS13CQ709C8 AL049634.1-201ENST00000453770 1720 ntBASIC5.14□□□□□ -1.59
VPS13CQ709C8 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS13CQ709C8 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VPS13CQ709C8 URB2-201ENST00000258243 5613 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS13CQ709C8 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
VPS13CQ709C8 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
VPS13CQ709C8 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS13CQ709C8 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS13CQ709C8 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS13CQ709C8 RPS21P4-201ENST00000487122 248 ntBASIC5.14□□□□□ -1.59
VPS13CQ709C8 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.14□□□□□ -1.59
VPS13CQ709C8 AC007956.1-201ENST00000555623 542 ntBASIC5.14□□□□□ -1.59
VPS13CQ709C8 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS13CQ709C8 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS13CQ709C8 AL359513.1-201ENST00000614364 557 ntBASIC5.14□□□□□ -1.59
VPS13CQ709C8 AL035661.1-201ENST00000620459 1144 ntBASIC5.14□□□□□ -1.59
VPS13CQ709C8 CU639417.4-201ENST00000623928 207 ntBASIC5.14□□□□□ -1.59
VPS13CQ709C8 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS13CQ709C8 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS13CQ709C8 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS13CQ709C8 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS13CQ709C8 MFSD8-219ENST00000641228 2559 ntBASIC5.14□□□□□ -1.59
VPS13CQ709C8 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS13CQ709C8 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS13CQ709C8 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
VPS13CQ709C8 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS13CQ709C8 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS13CQ709C8 FGF5-201ENST00000312465 4555 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS13CQ709C8 AC027279.4-201ENST00000624371 2072 ntBASIC5.13□□□□□ -1.59
VPS13CQ709C8 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS13CQ709C8 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VPS13CQ709C8 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS13CQ709C8 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VPS13CQ709C8 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.13□□□□□ -1.59
VPS13CQ709C8 AL390119.1-201ENST00000440329 312 ntBASIC5.13□□□□□ -1.59
VPS13CQ709C8 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS13CQ709C8 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS13CQ709C8 AL356801.1-201ENST00000559320 294 ntBASIC5.13□□□□□ -1.59
VPS13CQ709C8 ZNF322P1-201ENST00000568013 1209 ntBASIC5.13□□□□□ -1.59
VPS13CQ709C8 AP002884.5-201ENST00000595053 1132 ntBASIC5.13□□□□□ -1.59
VPS13CQ709C8 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS13CQ709C8 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS13CQ709C8 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS13CQ709C8 C2CD2-201ENST00000329623 5844 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS13CQ709C8 STAG1-210ENST00000629124 4322 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS13CQ709C8 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS13CQ709C8 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS13CQ709C8 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
VPS13CQ709C8 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS13CQ709C8 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS13CQ709C8 RNA5SP65-201ENST00000363166 119 ntBASIC5.13□□□□□ -1.59
VPS13CQ709C8 RNA5SP234-201ENST00000363916 119 ntBASIC5.13□□□□□ -1.59
VPS13CQ709C8 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS13CQ709C8 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS13CQ709C8 AL450996.1-201ENST00000445574 1202 ntBASIC5.13□□□□□ -1.59
VPS13CQ709C8 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS13CQ709C8 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS13CQ709C8 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VPS13CQ709C8 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS13CQ709C8 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS13CQ709C8 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS13CQ709C8 PABPC1P6-201ENST00000445594 1829 ntBASIC5.13□□□□□ -1.59
VPS13CQ709C8 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS13CQ709C8 TRMT5-201ENST00000261249 5573 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS13CQ709C8 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS13CQ709C8 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS13CQ709C8 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
VPS13CQ709C8 MYLK-205ENST00000360772 10027 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
VPS13CQ709C8 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms