Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
CDC42BPAQ5VT25 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC9.71□□□□□ -0.86
CDC42BPAQ5VT25 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
CDC42BPAQ5VT25 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
CDC42BPAQ5VT25 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
CDC42BPAQ5VT25 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC9.71□□□□□ -0.86
CDC42BPAQ5VT25 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
CDC42BPAQ5VT25 RNU4ATAC2P-201ENST00000408674 126 ntBASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 YWHABP1-201ENST00000445359 727 ntBASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 AC005077.1-201ENST00000449226 375 ntBASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 AC063943.2-201ENST00000495697 534 ntBASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 AL513218.1-201ENST00000606527 391 ntBASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 NEK2P4-201ENST00000425793 1329 ntBASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 AL512310.3-201ENST00000547023 1335 ntBASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 CUBNP3-201ENST00000457461 1784 ntBASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 AC023490.2-201ENST00000359859 470 ntBASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 RNA5SP284-201ENST00000384547 118 ntBASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 AL354890.1-201ENST00000413730 346 ntBASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 AC245047.1-201ENST00000433276 873 ntBASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 AP000281.1-201ENST00000444036 316 ntBASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 AC098847.1-201ENST00000473094 348 ntBASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 SCARNA18.1-201ENST00000516330 83 ntBASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 AL121579.2-201ENST00000555466 590 ntBASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 AP001823.1-201ENST00000604056 1003 ntBASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 MIR6729-201ENST00000618194 65 ntBASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 AC122713.2-201ENST00000624942 3335 ntBASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
CDC42BPAQ5VT25 ERVV-1-201ENST00000602168 2202 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 CIR1P2-201ENST00000514821 1342 ntBASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 AC007485.2-201ENST00000623493 1667 ntBASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 USP13-203ENST00000496897 2747 ntTSL 2 BASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 OR13C1P-202ENST00000641378 2919 ntBASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 OR52B3P-201ENST00000314715 928 ntBASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 RNA5SP510-201ENST00000364697 99 ntBASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 KRTAP2-5P-201ENST00000446109 396 ntBASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 RN7SL326P-201ENST00000477493 296 ntBASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 SCARNA21.2-201ENST00000516600 166 ntBASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 AC008555.7-201ENST00000605008 583 ntBASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 MIR7159-201ENST00000620587 66 ntBASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 MTCO1P11-201ENST00000429111 1528 ntBASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 ZC3H13-202ENST00000282007 6412 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42BPAQ5VT25 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 AL713922.1-201ENST00000416477 747 ntBASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 GAPDHP75-201ENST00000433910 943 ntBASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 RN7SL705P-201ENST00000481678 294 ntBASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 IGLV3-6-201ENST00000523937 250 ntBASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 FRMPD3-201ENST00000276185 7304 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
CDC42BPAQ5VT25 MAPK10-287ENST00000641217 3037 ntBASIC9.68□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms